RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
SYNGR3-204ENST00000564642 SAPCD1Q5SSQ6 148 aa12.77□□□□□ -0.37
SYNGR3-204ENST00000564642 FAM74A7A6NL05 159 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 PAX4O43316 350 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 BCL2L11O43521 198 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 GCGP01275 180 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 TYMSP04818 313 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 PPT1P50897 306 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 EIF5AP63241 154 aaKnown RBP12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 SLAQ13239 276 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 Q6ZR54 194 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 VSIG2Q96IQ7 327 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 MUC4Q99102 2169 aa12.76□□□□□ -0.37
SYNGR3-204ENST00000564642 TRAV34A0A0B4J273 112 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 TRGV4A0A0C4DH28 118 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 UMAD1C9J7I0 102 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 PFDN1O60925 122 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 ZNRF2Q8NHG8 242 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 RASL10AQ92737 203 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 HIST1H2BAQ96A08 127 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 LINC00479Q96M42 142 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 PRO0255Q9UI72 69 aa12.75□□□□□ -0.37
SYNGR3-204ENST00000564642 M0R2P5 195 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 PEX7O00628 323 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 PFN1P07737 140 aaKnown RBP12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 FHITP49789 147 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 SOHLH1Q5JUK2 328 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 TMUB2Q71RG4 321 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 HHLA3Q9XRX5 114 aa12.74□□□□□ -0.37
SYNGR3-204ENST00000564642 A0A096LPF7 62 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 FHL2Q14192 279 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 ESRGQ1W209 222 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 CST9LP1Q5W188 147 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 ICOSQ9Y6W8 199 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 DNAH10Q8IVF4 4471 aa12.73□□□□□ -0.37
SYNGR3-204ENST00000564642 RTL8CO15255 209 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 CRYBA4P53673 196 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 C1orf134Q5TEV5 83 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 SFT2D1Q8WV19 159 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 Q9H8V8 135 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
SYNGR3-204ENST00000564642 NBDYA0A0U1RRE5 68 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 PRSS29PA6NIE9 313 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 TPT1P13693 172 aaKnown RBP12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 DPPA3Q6W0C5 159 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 ZNF479Q96JC4 524 aa12.71□□□□□ -0.37
SYNGR3-204ENST00000564642 TRAV4A0A0B4J268 109 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 UBE2G1P62253 170 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 C11orf21Q9P2W6 132 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
SYNGR3-204ENST00000564642 A0A1B0GV50 99 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 PAGE4O60829 102 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 Q86TA4 180 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 FMC1Q96HJ9 113 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 ZFP30Q9Y2G7 519 aa12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 MRPS16Q9Y3D3 137 aaKnown RBP12.69□□□□□ -0.38
SYNGR3-204ENST00000564642 C9JCJ5 164 aa12.68□□□□□ -0.38
SYNGR3-204ENST00000564642 H2AFB1P0C5Y9 115 aa12.68□□□□□ -0.38
SYNGR3-204ENST00000564642 ZNF876PQ49A33 203 aa12.68□□□□□ -0.38
SYNGR3-204ENST00000564642 TCTE3Q8IZS6 198 aa12.68□□□□□ -0.38
SYNGR3-204ENST00000564642 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
SYNGR3-204ENST00000564642 Q6ZNX1 250 aa12.67□□□□□ -0.38
SYNGR3-204ENST00000564642 PCNPQ8WW12 178 aaKnown RBP12.67□□□□□ -0.38
SYNGR3-204ENST00000564642 ORM1P02763 201 aa12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 S100A4P26447 101 aaKnown RBP12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 AKR1C3P42330 323 aa12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 EIF5AL1Q6IS14 154 aaKnown RBP12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 NEGR1Q7Z3B1 354 aa12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 C9orf85Q96MD7 179 aa12.66□□□□□ -0.38
SYNGR3-204ENST00000564642 SRIP30626 198 aa12.65□□□□□ -0.38
SYNGR3-204ENST00000564642 TTC32Q5I0X7 151 aa12.65□□□□□ -0.38
SYNGR3-204ENST00000564642 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
SYNGR3-204ENST00000564642 IGKV3D-20A0A0C4DH25 116 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 TRBV6-1A0A0K0K1D8 114 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 K7EQD1 137 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 C1QBP02746 253 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 GYPEP15421 78 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 ASIPP42127 132 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 RAB5CP51148 216 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 LYPD5Q6UWN5 251 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
SYNGR3-204ENST00000564642 PGPEP1LA6NFU8 196 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 B4DEV8 164 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 CIDEAO60543 219 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 LTAP01374 205 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 S100A9P06702 114 aaKnown RBP12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 FAM162BQ5T6X4 162 aa12.63□□□□□ -0.39
SYNGR3-204ENST00000564642 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms