RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 A0A1B0GV50 99 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 GAGE7O76087 117 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 LY6G6CO95867 125 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 HTN3P15516 51 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 TMEM183BQ1AE95 376 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 SPXQ9BT56 116 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 MANBALQ9NQG1 85 aa12.16□□□□□ -0.46
USB1-209ENST00000564387 IGHV3-16A0A0C4DH30 117 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 TEX46H3BTG2 121 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 GNRH2O43555 120 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 LTAP01374 205 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 TMEM88Q6PEY1 159 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 TXNDC17Q9BRA2 123 aa12.15□□□□□ -0.46
USB1-209ENST00000564387 TYMSP04818 313 aa12.14□□□□□ -0.47
USB1-209ENST00000564387 S100A9P06702 114 aaKnown RBP12.14□□□□□ -0.47
USB1-209ENST00000564387 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
USB1-209ENST00000564387 RASL10AQ92737 203 aa12.14□□□□□ -0.47
USB1-209ENST00000564387 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 FABP5P3A8MUU1 101 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 F5H768 121 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 HOXA5P20719 270 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 CRIP1P50238 77 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 GNG13Q9P2W3 67 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
USB1-209ENST00000564387 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 H3BNG1 76 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 AKR1C3P42330 323 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 UBE2G1P62253 170 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 LYPD6BQ8NI32 183 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 MLST8Q9BVC4 326 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
USB1-209ENST00000564387 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 IGKV3D-20A0A0C4DH25 116 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 P0DMU3 169 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 ZNF674Q2M3X9 581 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 ALKAL2Q6UX46 152 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 MRPL16Q9NX20 251 aaKnown RBP12.11□□□□□ -0.47
USB1-209ENST00000564387 MUC4Q99102 2169 aa12.11□□□□□ -0.47
USB1-209ENST00000564387 DNLZQ5SXM8 178 aa12.1□□□□□ -0.47
USB1-209ENST00000564387 PTH2Q96A98 100 aa12.1□□□□□ -0.47
USB1-209ENST00000564387 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
USB1-209ENST00000564387 KMT2AQ03164 3969 aa12.1□□□□□ -0.47
USB1-209ENST00000564387 M0R2P5 195 aa12.09□□□□□ -0.47
USB1-209ENST00000564387 TAGLN2P37802 199 aaKnown RBP12.09□□□□□ -0.47
USB1-209ENST00000564387 BLOC1S1P78537 153 aa12.09□□□□□ -0.47
USB1-209ENST00000564387 MEF2BQ02080 365 aaPredicted RBP12.09□□□□□ -0.47
USB1-209ENST00000564387 BCL2P10415 239 aa12.08□□□□□ -0.48
USB1-209ENST00000564387 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.48
USB1-209ENST00000564387 RNF212Q495C1 297 aa12.08□□□□□ -0.48
USB1-209ENST00000564387 FAM162BQ5T6X4 162 aa12.08□□□□□ -0.48
USB1-209ENST00000564387 POM121L12Q8N7R1 296 aa12.08□□□□□ -0.48
USB1-209ENST00000564387 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 PDE6DO43924 150 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 SH2D1AO60880 128 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 IFNA1P01562 189 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
USB1-209ENST00000564387 OR5I1Q13606 314 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 FHL2Q14192 279 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 VAX2Q9UIW0 290 aa12.07□□□□□ -0.48
USB1-209ENST00000564387 LINC01559Q495D7 138 aa12.06□□□□□ -0.48
USB1-209ENST00000564387 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
USB1-209ENST00000564387 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
USB1-209ENST00000564387 SLAQ13239 276 aa12.05□□□□□ -0.48
USB1-209ENST00000564387 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
USB1-209ENST00000564387 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 B4DEV8 164 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 ORM1P02763 201 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 FAM3BP58499 235 aaPredicted RBP12.04□□□□□ -0.48
USB1-209ENST00000564387 SMIM12Q96EX1 92 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 IL36BQ9NZH7 164 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 PRO0255Q9UI72 69 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
USB1-209ENST00000564387 IGLV2-8P01709 118 aa12.03□□□□□ -0.48
USB1-209ENST00000564387 CRYBA4P53673 196 aa12.03□□□□□ -0.48
USB1-209ENST00000564387 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
USB1-209ENST00000564387 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
USB1-209ENST00000564387 A0A0J9YY99 117 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 CIDEAO60543 219 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 NDUFS6O75380 124 aaKnown RBP12.02□□□□□ -0.49
USB1-209ENST00000564387 NUDT3O95989 172 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 IGHV3-53P01767 116 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 CXCL1P09341 107 aa12.02□□□□□ -0.49
USB1-209ENST00000564387 ASIPP42127 132 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms