RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
RNF40-206ENST00000564260 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 SPINK4O60575 86 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 PRM2P04554 102 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 RPL35P42766 123 aaKnown RBP11.87□□□□□ -0.51
RNF40-206ENST00000564260 ZNF674Q2M3X9 581 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 ZNF506Q5JVG8 444 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 BAGE2Q86Y30 109 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 GSN-AS1Q9NRJ2 163 aa11.87□□□□□ -0.51
RNF40-206ENST00000564260 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
RNF40-206ENST00000564260 MUC21Q5SSG8 566 aa11.86□□□□□ -0.51
RNF40-206ENST00000564260 SMDT1Q9H4I9 107 aa11.86□□□□□ -0.51
RNF40-206ENST00000564260 BIN3Q9NQY0 253 aa11.86□□□□□ -0.51
RNF40-206ENST00000564260 ATP5G1P05496 136 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 PTH2Q96A98 100 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 ZC2HC1AQ96GY0 325 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 FAM210AQ96ND0 272 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 NAGKQ9UJ70 344 aa11.85□□□□□ -0.51
RNF40-206ENST00000564260 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
RNF40-206ENST00000564260 IGHV3-16A0A0C4DH30 117 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 TYMSP04818 313 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 CXCL1P09341 107 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 DEFB130BP0DP73 79 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 DEFB130AP0DP74 79 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 DNLZQ5SXM8 178 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 Q6ZQT7 251 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 RASL10AQ92737 203 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 STARD9Q9P2P6 4700 aa11.84□□□□□ -0.51
RNF40-206ENST00000564260 C9JCJ5 164 aa11.83□□□□□ -0.52
RNF40-206ENST00000564260 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
RNF40-206ENST00000564260 M0R2P5 195 aa11.82□□□□□ -0.52
RNF40-206ENST00000564260 CIDEAO60543 219 aa11.82□□□□□ -0.52
RNF40-206ENST00000564260 GNG4P50150 75 aa11.82□□□□□ -0.52
RNF40-206ENST00000564260 CRIP1P50238 77 aa11.82□□□□□ -0.52
RNF40-206ENST00000564260 MDFICQ9P1T7 246 aa11.82□□□□□ -0.52
RNF40-206ENST00000564260 TRGV2A0A075B6R0 118 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 TRGV1A0A0A0MS02 117 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 SH2D1AO60880 128 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 ZNF767PQ75MW2 155 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 EIF5A2Q9GZV4 153 aaKnown RBP11.81□□□□□ -0.52
RNF40-206ENST00000564260 C11orf21Q9P2W6 132 aa11.81□□□□□ -0.52
RNF40-206ENST00000564260 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 B4DEV8 164 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 KRBOX1C9JBD0 128 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 H3BNG1 76 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 ORM1P02763 201 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 ASIPP42127 132 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 RAB14P61106 215 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 SLAQ13239 276 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 Q6ZTI0 123 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 LY96Q9Y6Y9 160 aa11.8□□□□□ -0.52
RNF40-206ENST00000564260 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GAGE12BA1L429 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 IGLL5B9A064 214 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GNRH2O43555 120 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GAGE7O76087 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 MED14OSP0DP75 135 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
RNF40-206ENST00000564260 TOR2AQ5JU69 321 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 TENM2Q9NT68 2774 aa11.79□□□□□ -0.52
RNF40-206ENST00000564260 IGLV2-8P01709 118 aa11.77□□□□□ -0.53
RNF40-206ENST00000564260 RNASE3P12724 160 aaKnown RBP11.77□□□□□ -0.53
RNF40-206ENST00000564260 PEA15Q15121 130 aa11.77□□□□□ -0.53
RNF40-206ENST00000564260 FAM74A3Q4VXF1 159 aa11.77□□□□□ -0.53
RNF40-206ENST00000564260 DAZAP1Q96EP5 407 aaKnown RBP11.77□□□□□ -0.53
RNF40-206ENST00000564260 PARLQ9H300 379 aa11.77□□□□□ -0.53
RNF40-206ENST00000564260 APLNQ9ULZ1 77 aa11.77□□□□□ -0.53
RNF40-206ENST00000564260 TRBV20OR9-2A0A075B6H5 130 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 TRAV4A0A0B4J268 109 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 XKRY2A2RUG3 117 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 F5H768 121 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 RPS20P60866 119 aaKnown RBP11.76□□□□□ -0.53
RNF40-206ENST00000564260 LGALS9CQ6DKI2 356 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 NHLRC2Q8NBF2 726 aa11.76□□□□□ -0.53
RNF40-206ENST00000564260 LCE6AA0A183 80 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 HTN3P15516 51 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 OR5I1Q13606 314 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 SYT8Q8NBV8 401 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
RNF40-206ENST00000564260 MRPL16Q9NX20 251 aaKnown RBP11.75□□□□□ -0.53
RNF40-206ENST00000564260 RAB19A4D1S5 217 aa11.74□□□□□ -0.53
RNF40-206ENST00000564260 C19orf71A6NCJ1 209 aa11.74□□□□□ -0.53
RNF40-206ENST00000564260 M0R036 132 aa11.74□□□□□ -0.53
RNF40-206ENST00000564260 SRP19P09132 144 aaKnown RBP11.74□□□□□ -0.53
RNF40-206ENST00000564260 MGST1P10620 155 aaKnown RBP11.74□□□□□ -0.53
RNF40-206ENST00000564260 CLLU1Q5K131 121 aa11.74□□□□□ -0.53
RNF40-206ENST00000564260 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
RNF40-206ENST00000564260 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms