RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 HHLA3Q9XRX5 114 aa11.41□□□□□ -0.58
HDGFL3-203ENST00000563404 A0A1W2PPV4 95 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 TAS2R45P59539 299 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 KRTAP10-1P60331 282 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 AKR1C8PQ5T2L2 129 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 Q8TAT8 98 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
HDGFL3-203ENST00000563404 A0A087WTM6 91 aa11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 FXYD5Q96DB9 178 aa11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 MDFICQ9P1T7 246 aa11.39□□□□□ -0.59
HDGFL3-203ENST00000563404 EREGO14944 169 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 SFTA3P0C7M3 94 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 ZNF138P52744 262 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 RAB2AP61019 212 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 SLAQ13239 276 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 PQLC2Q6ZP29 291 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 ZNF479Q96JC4 524 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 OR51M1Q9H341 326 aa11.38□□□□□ -0.59
HDGFL3-203ENST00000563404 K7EQD1 137 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 OR10J4P0C629 311 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 KHDC3LQ587J8 217 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 MUC21Q5SSG8 566 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
HDGFL3-203ENST00000563404 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 CDC34P49427 236 aaPredicted RBP11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 Q5VSD8 79 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 TMED6Q8WW62 240 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 RAB24Q969Q5 203 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
HDGFL3-203ENST00000563404 DMBT1Q9UGM3 2413 aaPredicted RBP11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 CTXND1A0A1B0GTU2 59 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 SULT1A2P50226 295 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 IQCF2Q8IXL9 164 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 SUN5Q8TC36 379 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
HDGFL3-203ENST00000563404 GYPEP15421 78 aa11.34□□□□□ -0.59
HDGFL3-203ENST00000563404 SRIP30626 198 aa11.34□□□□□ -0.59
HDGFL3-203ENST00000563404 RASL10AQ92737 203 aa11.34□□□□□ -0.59
HDGFL3-203ENST00000563404 TRAV9-2A0A087WT02 112 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 CXorf1O96002 111 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 Q6AWC8 147 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 SRRM2Q9UQ35 2752 aaKnown RBP11.33□□□□□ -0.6
HDGFL3-203ENST00000563404 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 OR7C2O60412 319 aa11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 SMR3BP02814 79 aaPredicted RBP11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 TMEM167BQ9NRX6 74 aa11.32□□□□□ -0.6
HDGFL3-203ENST00000563404 CSN1S1P47710 185 aa11.31□□□□□ -0.6
HDGFL3-203ENST00000563404 HAMPP81172 84 aa11.31□□□□□ -0.6
HDGFL3-203ENST00000563404 TEX261Q6UWH6 196 aa11.31□□□□□ -0.6
HDGFL3-203ENST00000563404 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
HDGFL3-203ENST00000563404 SPXQ9BT56 116 aa11.31□□□□□ -0.6
HDGFL3-203ENST00000563404 DIRC3C9JPN6 131 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 K7EP13 123 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 ORM1P02763 201 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 EVI2AP22794 236 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 GCSHP23434 173 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 FAM213BQ8TBF2 198 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 PCNPQ8WW12 178 aaKnown RBP11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 FRZBQ92765 325 aa11.3□□□□□ -0.6
HDGFL3-203ENST00000563404 TRGV11A0A075B6L2 103 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 TRAV4A0A0B4J268 109 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 GNRH2O43555 120 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 IFNA7P01567 189 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 CRYGDP07320 174 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 GCHFRP30047 84 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 FHITP49789 147 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 BLOC1S1P78537 153 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 FAM159AQ6UWV7 190 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
HDGFL3-203ENST00000563404 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
HDGFL3-203ENST00000563404 IGHV3-16A0A0C4DH30 117 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms