RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SAPCD1Q5SSQ6 148 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 Q6ZTI0 123 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 PRNTQ86SH4 94 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 SLC51BQ86UW2 128 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 C18orf15Q96N68 181 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 KLF12Q9Y4X4 402 aa11.65□□□□□ -0.54
CDT1-202ENST00000562747 P0DMU3 169 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 FAM231AP0DMU4 169 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 FAM231CP0DMU5 169 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 LGALS9BQ3B8N2 356 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 C8orf49Q96NF6 230 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
CDT1-202ENST00000562747 TRGV1A0A0A0MS02 117 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 NAGKQ9UJ70 344 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 PKD1P98161 4303 aa11.63□□□□□ -0.55
CDT1-202ENST00000562747 TRGV2A0A075B6R0 118 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 TRAV34A0A0B4J273 112 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 PAGE4O60829 102 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 GCGP01275 180 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
CDT1-202ENST00000562747 SULT1A2P50226 295 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 TMEM183BQ1AE95 376 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 TMEM183AQ8IXX5 376 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 C9orf62Q8N4C0 152 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 SPXQ9BT56 116 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 SDF2L1Q9HCN8 221 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 MDFICQ9P1T7 246 aa11.62□□□□□ -0.55
CDT1-202ENST00000562747 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
CDT1-202ENST00000562747 A0A1B0GV50 99 aa11.61□□□□□ -0.55
CDT1-202ENST00000562747 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
CDT1-202ENST00000562747 Q86TA4 180 aa11.61□□□□□ -0.55
CDT1-202ENST00000562747 FMC1Q96HJ9 113 aa11.61□□□□□ -0.55
CDT1-202ENST00000562747 A0A1B0GVG6 124 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 TEX46H3BTG2 121 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 TYMSP04818 313 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 OR5I1Q13606 314 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 LINC00336Q6ZUF6 198 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
CDT1-202ENST00000562747 IGHV3-16A0A0C4DH30 117 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 GNRH2O43555 120 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 HOXA5P20719 270 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 UBE2G1P62253 170 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 POM121L12Q8N7R1 296 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
CDT1-202ENST00000562747 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
CDT1-202ENST00000562747 RTL8CO15255 209 aa11.58□□□□□ -0.56
CDT1-202ENST00000562747 AKR1C3P42330 323 aa11.58□□□□□ -0.56
CDT1-202ENST00000562747 COX8CQ7Z4L0 72 aa11.58□□□□□ -0.56
CDT1-202ENST00000562747 RASL10AQ92737 203 aa11.58□□□□□ -0.56
CDT1-202ENST00000562747 C11orf21Q9P2W6 132 aa11.58□□□□□ -0.56
CDT1-202ENST00000562747 TRAV26-1A0A087WT03 109 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 FABP5P3A8MUU1 101 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 H3BNG1 76 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 NUDT3O95989 172 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 S100A9P06702 114 aaKnown RBP11.57□□□□□ -0.56
CDT1-202ENST00000562747 RNF212Q495C1 297 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
CDT1-202ENST00000562747 M0R2P5 195 aa11.56□□□□□ -0.56
CDT1-202ENST00000562747 LTAP01374 205 aa11.56□□□□□ -0.56
CDT1-202ENST00000562747 CCL20P78556 96 aa11.56□□□□□ -0.56
CDT1-202ENST00000562747 TXNDC17Q9BRA2 123 aa11.56□□□□□ -0.56
CDT1-202ENST00000562747 SCO2A0A1W2PP80 73 aa11.55□□□□□ -0.56
CDT1-202ENST00000562747 PRSS29PA6NIE9 313 aa11.55□□□□□ -0.56
CDT1-202ENST00000562747 MED14OSP0DP75 135 aa11.55□□□□□ -0.56
CDT1-202ENST00000562747 ZC2HC1AQ96GY0 325 aa11.55□□□□□ -0.56
CDT1-202ENST00000562747 GNG13Q9P2W3 67 aa11.55□□□□□ -0.56
CDT1-202ENST00000562747 A0A0J9YY99 117 aa11.54□□□□□ -0.56
CDT1-202ENST00000562747 M0R2N4 97 aa11.54□□□□□ -0.56
CDT1-202ENST00000562747 FAM3BP58499 235 aaPredicted RBP11.54□□□□□ -0.56
CDT1-202ENST00000562747 SLAQ13239 276 aa11.54□□□□□ -0.56
CDT1-202ENST00000562747 MUC4Q99102 2169 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 IGHV3-53P01767 116 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 CRIP1P50238 77 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 FAM162BQ5T6X4 162 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 KRTAP4-5Q9BYR2 181 aa11.53□□□□□ -0.56
CDT1-202ENST00000562747 TRAV4A0A0B4J268 109 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 IFNA1P01562 189 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 CCL18P55774 89 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 FHL2Q14192 279 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 ZNF674Q2M3X9 581 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 C11orf52Q96A22 123 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 VSIG2Q96IQ7 327 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 PRO0255Q9UI72 69 aa11.52□□□□□ -0.57
CDT1-202ENST00000562747 SH2D1AO60880 128 aa11.51□□□□□ -0.57
CDT1-202ENST00000562747 ORM1P02763 201 aa11.51□□□□□ -0.57
CDT1-202ENST00000562747 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
CDT1-202ENST00000562747 NKX2-5P52952 324 aaPredicted RBP11.51□□□□□ -0.57
CDT1-202ENST00000562747 PTH2Q96A98 100 aa11.51□□□□□ -0.57
CDT1-202ENST00000562747 ZNF479Q96JC4 524 aa11.51□□□□□ -0.57
CDT1-202ENST00000562747 HHLA3Q9XRX5 114 aa11.51□□□□□ -0.57
CDT1-202ENST00000562747 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
CDT1-202ENST00000562747 B4DEV8 164 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms