RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SMIM13P0DJ93 91 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 SMIM17P0DL12 118 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ARL3P36405 182 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ID1P41134 155 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 RPL32P62910 135 aaKnown RBP5.73□□□□□ -1.49
CFDP1-202ENST00000562602 LOXL1Q08397 574 aaPredicted RBP5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ERCC8Q13216 396 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ODF1Q14990 250 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 FAM106AQ4KMX7 169 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ANKRD39Q53RE8 183 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 AMMECR1LQ6DCA0 310 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ADAMTSL5Q6ZMM2 481 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 GLMPQ8WWB7 406 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ITLN2Q8WWU7 325 aaPredicted RBP5.73□□□□□ -1.49
CFDP1-202ENST00000562602 KRTAP9-3Q9BYQ3 159 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 BPESC1Q9GZL8 116 aa5.73□□□□□ -1.49
CFDP1-202ENST00000562602 ANKHD1Q8IWZ3 2542 aaKnown RBP5.72□□□□□ -1.49
CFDP1-202ENST00000562602 IGLV2-18A0A075B6J9 118 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 A0A087WX48 190 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 TMEM89A2RUT3 159 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 PRAC2D3DTV9 90 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 LINC01619G3V211 115 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 SMKR1H3BMG3 65 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 H7C1H1 209 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 K7EMT4 169 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 GATA3P23771 443 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 HLA-DMBP28068 263 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 ASIPP42127 132 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 NMUP48645 174 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 DSCR9P59020 149 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 CDSNQ15517 529 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 PAPPA-AS1Q5QFB9 102 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 ERASQ7Z444 233 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 ZNF575Q86XF7 245 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 APRG1Q8IVJ8 170 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 DPH3P1Q9H4G8 78 aa5.72□□□□□ -1.49
CFDP1-202ENST00000562602 ASH1LQ9NR48 2969 aaKnown RBP5.72□□□□□ -1.49
CFDP1-202ENST00000562602 COL12A1Q99715 3063 aa5.71□□□□□ -1.49
CFDP1-202ENST00000562602 IGHV7-4-1A0A0J9YVY3 117 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 GAGE12BA1L429 117 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 G3V318 75 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 K7EP34 96 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 IGHG2P01859 326 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 PRB4P10163 310 aaPredicted RBP5.71□□□□□ -1.5
CFDP1-202ENST00000562602 FABP2P12104 132 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 S100A4P26447 101 aaKnown RBP5.71□□□□□ -1.5
CFDP1-202ENST00000562602 FOXE3Q13461 319 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 OCIAD2Q56VL3 154 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 IGFL4Q6B9Z1 124 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 RNF182Q8N6D2 247 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 NRACQ8N912 160 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 FOXC2Q99958 501 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 MCRIP2Q9BUT9 160 aaKnown RBP5.71□□□□□ -1.5
CFDP1-202ENST00000562602 SMIM2Q9BVW6 85 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 CST9LQ9H4G1 147 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 MSRB1Q9NZV6 116 aa5.71□□□□□ -1.5
CFDP1-202ENST00000562602 APC2O95996 2303 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3-35A0A0C4DH35 117 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 ZNF207O43670 478 aaKnown RBP5.7□□□□□ -1.5
CFDP1-202ENST00000562602 RBX1P62877 108 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 CLEC2AQ6UVW9 174 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 ODF3Q96PU9 254 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 TM2D2Q9BX73 214 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 UFC1Q9Y3C8 167 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
CFDP1-202ENST00000562602 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
CFDP1-202ENST00000562602 TRAV8-6A0A0B4J262 113 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 A0A1W2PPM0 123 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 A6NDX4 124 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 F8VRH5 84 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 SOCS3O14543 225 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 PRB1P04280 392 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 PPIFP30405 207 aaKnown RBP5.69□□□□□ -1.5
CFDP1-202ENST00000562602 PCP4P48539 62 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 SUMO2P61956 95 aaKnown RBP5.69□□□□□ -1.5
CFDP1-202ENST00000562602 ZC2HC1BQ5TFG8 222 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 UFSP1Q6NVU6 142 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 Q6ZVH6 145 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 POM121L12Q8N7R1 296 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 C18orf15Q96N68 181 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 CHAC1Q9BUX1 264 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 PRORYQ9H606 182 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
CFDP1-202ENST00000562602 ABCA1O95477 2261 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 PCNX1Q96RV3 2341 aa5.69□□□□□ -1.5
CFDP1-202ENST00000562602 HELZ2Q9BYK8 2649 aaKnown RBP5.68□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV4OR15-8A0A075B7B6 117 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3OR16-8A0A075B7F1 116 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 A0A087WW49 117 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 A0A1W2PPR1 153 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 H3BVH4 76 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 NXPH4O95158 308 aa5.68□□□□□ -1.5
CFDP1-202ENST00000562602 IGHV4-39P01824 125 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms