RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 PEX7O00628 323 aa13.46□□□□□ -0.25
TMEM249-202ENST00000562477 SEC11BP0C7V7 166 aa13.46□□□□□ -0.25
TMEM249-202ENST00000562477 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.25
TMEM249-202ENST00000562477 TDRG1Q3Y452 100 aa13.46□□□□□ -0.25
TMEM249-202ENST00000562477 VSIG2Q96IQ7 327 aa13.46□□□□□ -0.25
TMEM249-202ENST00000562477 PFDN1O60925 122 aa13.45□□□□□ -0.26
TMEM249-202ENST00000562477 GCGP01275 180 aa13.45□□□□□ -0.26
TMEM249-202ENST00000562477 TYMSP04818 313 aa13.45□□□□□ -0.26
TMEM249-202ENST00000562477 LINC00588Q9Y4M8 146 aa13.45□□□□□ -0.26
TMEM249-202ENST00000562477 HECTD4Q9Y4D8 3996 aa13.44□□□□□ -0.26
TMEM249-202ENST00000562477 hCG_2014768A0A024R1R8 64 aa13.44□□□□□ -0.26
TMEM249-202ENST00000562477 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
TMEM249-202ENST00000562477 SFTA3P0C7M3 94 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 SMUG1Q53HV7 270 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 STOML3Q8TAV4 291 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 SFT2D1Q8WV19 159 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 MBD3L1Q8WWY6 194 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 SPXQ9BT56 116 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 SDF2L1Q9HCN8 221 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 ARL2-SNX15V9GYD0 113 aa13.43□□□□□ -0.26
TMEM249-202ENST00000562477 UMAD1C9J7I0 102 aa13.42□□□□□ -0.26
TMEM249-202ENST00000562477 LGALSLQ3ZCW2 172 aaPredicted RBP13.42□□□□□ -0.26
TMEM249-202ENST00000562477 CST9LP1Q5W188 147 aa13.42□□□□□ -0.26
TMEM249-202ENST00000562477 Q6ZR54 194 aa13.42□□□□□ -0.26
TMEM249-202ENST00000562477 Q86TA4 180 aa13.42□□□□□ -0.26
TMEM249-202ENST00000562477 ZNRF2Q8NHG8 242 aa13.42□□□□□ -0.26
TMEM249-202ENST00000562477 PAGE4O60829 102 aa13.41□□□□□ -0.26
TMEM249-202ENST00000562477 PFN1P07737 140 aaKnown RBP13.41□□□□□ -0.26
TMEM249-202ENST00000562477 CCL18P55774 89 aa13.41□□□□□ -0.26
TMEM249-202ENST00000562477 FHL2Q14192 279 aa13.41□□□□□ -0.26
TMEM249-202ENST00000562477 RASL10AQ92737 203 aa13.41□□□□□ -0.26
TMEM249-202ENST00000562477 ZNF479Q96JC4 524 aa13.41□□□□□ -0.26
TMEM249-202ENST00000562477 NKX6-2Q9C056 277 aaPredicted RBP13.41□□□□□ -0.26
TMEM249-202ENST00000562477 A0A096LPF7 62 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 FBLL1A6NHQ2 334 aaKnown RBP13.4□□□□□ -0.26
TMEM249-202ENST00000562477 H3BNG1 76 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 M0R2P5 195 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 PAX4O43316 350 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.26
TMEM249-202ENST00000562477 PPT1P50897 306 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 FAM3BP58499 235 aaPredicted RBP13.4□□□□□ -0.26
TMEM249-202ENST00000562477 EIF5AP63241 154 aaKnown RBP13.4□□□□□ -0.26
TMEM249-202ENST00000562477 ESRGQ1W209 222 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 ZFP69Q49AA0 526 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 SAPCD1Q5SSQ6 148 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 HIST1H2BAQ96A08 127 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 KCNS1Q96KK3 526 aa13.4□□□□□ -0.26
TMEM249-202ENST00000562477 RTL8CO15255 209 aa13.39□□□□□ -0.27
TMEM249-202ENST00000562477 DPPA3Q6W0C5 159 aa13.38□□□□□ -0.27
TMEM249-202ENST00000562477 TRGV4A0A0C4DH28 118 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 C1QBP02746 253 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 H2AFB1P0C5Y9 115 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 CRYBA4P53673 196 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 ZC2HC1AQ96GY0 325 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 HHLA3Q9XRX5 114 aa13.37□□□□□ -0.27
TMEM249-202ENST00000562477 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 C9JCJ5 164 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 CRIP1P50238 77 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 CCL20P78556 96 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 C9orf85Q96MD7 179 aa13.36□□□□□ -0.27
TMEM249-202ENST00000562477 SCO2A0A1W2PP80 73 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 RNASE3P12724 160 aaKnown RBP13.35□□□□□ -0.27
TMEM249-202ENST00000562477 AKR1C3P42330 323 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 OR4C5Q8NGB2 326 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 FMC1Q96HJ9 113 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 ICOSQ9Y6W8 199 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 PKHD1P08F94 4074 aa13.35□□□□□ -0.27
TMEM249-202ENST00000562477 NBDYA0A0U1RRE5 68 aa13.34□□□□□ -0.27
TMEM249-202ENST00000562477 UBE2G1P62253 170 aa13.34□□□□□ -0.27
TMEM249-202ENST00000562477 MRPS16Q9Y3D3 137 aaKnown RBP13.34□□□□□ -0.27
TMEM249-202ENST00000562477 TRBV6-1A0A0K0K1D8 114 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 FABP5P3A8MUU1 101 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 SH2D1AO60880 128 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 LTAP01374 205 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 SLAQ13239 276 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 ZNF876PQ49A33 203 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 LINC00336Q6ZUF6 198 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 NHLRC2Q8NBF2 726 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 TCEAL7Q9BRU2 100 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 Q9H8V8 135 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
TMEM249-202ENST00000562477 PGPEP1LA6NFU8 196 aa13.32□□□□□ -0.28
TMEM249-202ENST00000562477 M0R036 132 aa13.32□□□□□ -0.28
TMEM249-202ENST00000562477 ZNF506Q5JVG8 444 aa13.32□□□□□ -0.28
TMEM249-202ENST00000562477 COX8CQ7Z4L0 72 aa13.32□□□□□ -0.28
TMEM249-202ENST00000562477 DYNC1H1Q14204 4646 aaKnown RBP13.32□□□□□ -0.28
TMEM249-202ENST00000562477 LOC100131303A0A0U1RQF7 123 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 A0A1B0GVG6 124 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 PRSS29PA6NIE9 313 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 B4DEV8 164 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 ORM1P02763 201 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 GYPEP15421 78 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 SULT1A2P50226 295 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 C1orf134Q5TEV5 83 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 SLC51BQ86UW2 128 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
TMEM249-202ENST00000562477 UPK3BQ9BT76 320 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms