RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SIVA1O15304 175 aa8.9□□□□□ -0.99
PCAT1-202ENST00000561978 TEX43Q6ZNM6 134 aa8.9□□□□□ -0.99
PCAT1-202ENST00000561978 NIT1Q86X76 327 aa8.9□□□□□ -0.99
PCAT1-202ENST00000561978 CHCHD1Q96BP2 118 aaKnown RBP8.9□□□□□ -0.99
PCAT1-202ENST00000561978 LINC00527Q9UJ94 153 aa8.9□□□□□ -0.99
PCAT1-202ENST00000561978 ZNF580Q9UK33 172 aa8.9□□□□□ -0.99
PCAT1-202ENST00000561978 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
PCAT1-202ENST00000561978 KRTDAPP60985 99 aa8.89□□□□□ -0.99
PCAT1-202ENST00000561978 VGLL1Q99990 258 aa8.89□□□□□ -0.99
PCAT1-202ENST00000561978 DNHD1Q96M86 4753 aa8.89□□□□□ -0.99
PCAT1-202ENST00000561978 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 NTF3P20783 257 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
PCAT1-202ENST00000561978 ZNF493Q6ZR52 646 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 CST9LQ9H4G1 147 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 IGHV3-66A0A0C4DH42 116 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 M0R2Z0 102 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 CD33P20138 364 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 HLA-DMBP28068 263 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 JMJD8Q96S16 334 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 ASCL2Q99929 193 aa8.88□□□□□ -0.99
PCAT1-202ENST00000561978 KIR2DL5BA0A0G2JN68 375 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 KIR2DL5BA0A0G2JPC4 375 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 M0QZ24 198 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 BLCAPP62952 87 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 KRTAP24-1Q3LI83 254 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 TMEM78Q5T7P6 136 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 KIR2DL5AQ8N109 375 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 FAM19A2Q8N3H0 131 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 VAMP8Q9BV40 100 aa8.87□□□□□ -0.99
PCAT1-202ENST00000561978 ZNF207O43670 478 aaKnown RBP8.86□□□□□ -0.99
PCAT1-202ENST00000561978 TCTEX1D4Q5JR98 221 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 C3orf79P0CE67 100 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 ZNF138P52744 262 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 HIST1H1AQ02539 215 aaPredicted RBP8.86□□□□□ -0.99
PCAT1-202ENST00000561978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
PCAT1-202ENST00000561978 OR4X2Q8NGF9 303 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 Q8TAT8 98 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 MDFIQ99750 246 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
PCAT1-202ENST00000561978 TRRAPQ9Y4A5 3859 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 IGHV3OR16-13A0A075B7E8 117 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 IGHV3-74A0A0B4J1X5 117 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 TMEM89A2RUT3 159 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 PRAC2D3DTV9 90 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 ORM1P02763 201 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 RNASE1P07998 156 aaKnown RBP8.85□□□□□ -0.99
PCAT1-202ENST00000561978 PRB4P10163 310 aaPredicted RBP8.85□□□□□ -0.99
PCAT1-202ENST00000561978 CKS1BP61024 79 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 ERCC8Q13216 396 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 PMCHL1Q16048 86 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 C9orf47Q6ZRZ4 202 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 FER1L6-AS1Q8NA97 138 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 NPFFR1Q9GZQ6 430 aa8.85□□□□□ -0.99
PCAT1-202ENST00000561978 TMSB15BA0A087X1C1 80 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 CTRLP40313 264 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 ZNF80P51504 273 aaPredicted RBP8.84□□□□□ -0.99
PCAT1-202ENST00000561978 AGPAT4-IT1Q9H0P7 198 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 LENEPQ9Y5L5 61 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 CFHR3Q02985 330 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 RNF152Q8N8N0 203 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 Q8N976 141 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 KLK15Q9H2R5 256 aa8.84□□□□□ -0.99
PCAT1-202ENST00000561978 M0QXV9 152 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 TNFRSF6BO95407 300 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 IGLC6P0CF74 106 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 TMEM86BQ8N661 226 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 LINC00477Q96M19 166 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 TSSC4Q9Y5U2 329 aaPredicted RBP8.83□□□□□ -1
PCAT1-202ENST00000561978 ANK2Q01484 3957 aa8.83□□□□□ -1
PCAT1-202ENST00000561978 K7EMT4 169 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 OVOL1O14753 267 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 TRBV12-3P01733 135 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 IGHV3-11P01762 117 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 TWIST1Q15672 202 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 FAM106AQ4KMX7 169 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 TMEM158Q8WZ71 300 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 CNFNQ9BYD5 112 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 RNF114Q9Y508 228 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 U3KQK5 164 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 TMEM213A2RRL7 107 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 LEPROTL1O95214 131 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 Q6ZS46 218 aa8.82□□□□□ -1
PCAT1-202ENST00000561978 ORMDL3Q8N138 153 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms