RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 AKR1C8PQ5T2L2 129 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 C1orf194Q5T5A4 169 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PRSS54Q6PEW0 395 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 C9orf47Q6ZRZ4 202 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 ZNF664Q8N3J9 261 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 TOMM5Q8N4H5 51 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 ZNF738Q8NE65 137 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 ATG5Q9H1Y0 275 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 ENY2Q9NPA8 101 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 CACFD1Q9UGQ2 172 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 PRO0255Q9UI72 69 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 HHLA3Q9XRX5 114 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 FUT9Q9Y231 359 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 V9GY05 133 aa3.43□□□□□ -1.86
HERC1-213ENST00000561359 FXYD6-FXYD2A0A087WZ82 144 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 SERTM2A0A1B0GWG4 89 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 SMCO3A2RU48 225 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 STAG3L3P0CL85 134 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 GALR1P47211 349 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 CAV2P51636 162 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 RPS25P62851 125 aaKnown RBP3.42□□□□□ -1.86
HERC1-213ENST00000561359 DAZ2Q13117 558 aaKnown RBP3.42□□□□□ -1.86
HERC1-213ENST00000561359 SLAQ13239 276 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 ATP6V1FQ16864 119 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 IZUMO4Q1ZYL8 232 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 TMEM241Q24JQ0 296 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 KHDC3LQ587J8 217 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 LINC01556Q5JQF7 62 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 FFAR4Q5NUL3 377 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 ACOT7LQ6ZUV0 252 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 RNF182Q8N6D2 247 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 ORAOV1Q8WV07 137 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 BAALCQ8WXS3 180 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 NPIPB3Q92617 1050 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 SMIM12Q96EX1 92 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 ACY3Q96HD9 319 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 SEC22AQ96IW7 307 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 RSG1Q9BU20 258 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 FXYD6Q9H0Q3 95 aa3.42□□□□□ -1.86
HERC1-213ENST00000561359 TEX13DA0A0J9YY54 714 aaPredicted RBP3.41□□□□□ -1.86
HERC1-213ENST00000561359 C20orf202A1L168 122 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 C7orf77A4D0Y5 90 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 K7EQD1 137 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 CCSO14618 274 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 PHOX2AO14813 284 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 ARL6IP5O75915 188 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-30P01768 117 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-33P01772 117 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 SFTA3P0C7M3 94 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-30-3P0DP02 117 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 IGHV3-30-5P0DP03 117 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 GZMBP10144 247 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 CDC34P49427 236 aaPredicted RBP3.41□□□□□ -1.86
HERC1-213ENST00000561359 CRYBA4P53673 196 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 NDUFA6P56556 154 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 LYZP61626 148 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 FABP5Q01469 135 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 TWIST1Q15672 202 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 COL5A1-AS1Q5SY13 56 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 GGNBP1Q5YKI7 109 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 LINC01551Q86U37 167 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 SAMD12Q8N8I0 201 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 Q8N976 141 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 THAP8Q8NA92 274 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 OR51S1Q8NGJ8 323 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 SMIM4Q8WVI0 70 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 MRGPRFQ96AM1 343 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 C20orf144Q9BQM9 153 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 SLC25A31Q9H0C2 315 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 TNFSF18Q9UNG2 199 aa3.41□□□□□ -1.86
HERC1-213ENST00000561359 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 A0A087WWC5 75 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 A0A0A6YYH2 397 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 TRGV4A0A0C4DH28 118 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 ANKRD20A5PA0PJZ0 165 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 A6NJ64 397 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 INS-IGF2F8WCM5 200 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 GABARAPH6UMI1 98 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BKO60814 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 NDUFB6O95139 128 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BJP06899 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 SCGB1A1P11684 91 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 TPT1P13693 172 aaKnown RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BOP23527 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 GATA2P23769 480 aaPredicted RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BBP33778 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 SULT1A1P50225 295 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 H2BFSP57053 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BDP58876 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 KRTAP10-8P60410 259 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST1H2BCP62807 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 RPL19P84098 196 aaKnown RBP3.4□□□□□ -1.87
HERC1-213ENST00000561359 GUK1Q16774 197 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 HIST2H2BEQ16778 126 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 PHLDA2Q53GA4 152 aa3.4□□□□□ -1.87
HERC1-213ENST00000561359 COA6Q5JTJ3 125 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms