RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 KLF12Q9Y4X4 402 aa7.71□□□□□ -1.18
TPM1-229ENST00000561242 VWFP04275 2813 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 C9JCJ5 164 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 LTAP01374 205 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 P01737 135 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 TCL1AP56279 114 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 DAZ2Q13117 558 aaKnown RBP7.7□□□□□ -1.18
TPM1-229ENST00000561242 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 ZNF506Q5JVG8 444 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 NHLRC2Q8NBF2 726 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 PCNPQ8WW12 178 aaKnown RBP7.7□□□□□ -1.18
TPM1-229ENST00000561242 BORCS7Q96B45 105 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 FAM210BQ96KR6 192 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 NDUFAF3Q9BU61 184 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 SMDT1Q9H4I9 107 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 PHLDA3Q9Y5J5 127 aa7.7□□□□□ -1.18
TPM1-229ENST00000561242 NOTCH1P46531 2555 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 ZNF727A8MUV8 499 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 M0R036 132 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 M0R2P5 195 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 GNRH2O43555 120 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 SH2D1AO60880 128 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 SMIM17P0DL12 118 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 FAM74A3Q4VXF1 159 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 CENPWQ5EE01 88 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 Q6ZTC4 211 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 C15orf54Q8N8G6 183 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 OR4C5Q8NGB2 326 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 RNASE8Q8TDE3 154 aaKnown RBP7.69□□□□□ -1.18
TPM1-229ENST00000561242 C11orf52Q96A22 123 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 FAM210AQ96ND0 272 aa7.69□□□□□ -1.18
TPM1-229ENST00000561242 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 CIDEAO60543 219 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 PRM2P04554 102 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 TDRG1Q3Y452 100 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 CASC10Q5T4H9 136 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 LCE2DQ5TA82 110 aaPredicted RBP7.68□□□□□ -1.18
TPM1-229ENST00000561242 SPANXN1Q5VSR9 72 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 SMIM15Q7Z3B0 74 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.68□□□□□ -1.18
TPM1-229ENST00000561242 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 TPPP3Q9BW30 176 aa7.68□□□□□ -1.18
TPM1-229ENST00000561242 PKD1L1Q8TDX9 2849 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 IGLV2-11P01706 119 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 TYMSP04818 313 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 ERVFC1-1P60608 527 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 ZNF876PQ49A33 203 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 SOHLH1Q5JUK2 328 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 PRR9Q5T870 116 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 C15orf53Q8NAA6 179 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 OR2D3Q8NGH3 330 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 TVP23CQ96ET8 276 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 ZC2HC1AQ96GY0 325 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 PARLQ9H300 379 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
TPM1-229ENST00000561242 TP53TG3Q9ULZ0 132 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 CELA1Q9UNI1 258 aa7.67□□□□□ -1.18
TPM1-229ENST00000561242 GRIFINA4D1Z8 144 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 NDUFS6O75380 124 aaKnown RBP7.66□□□□□ -1.18
TPM1-229ENST00000561242 NUDT3O95989 172 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 ZFP82Q8N141 532 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
TPM1-229ENST00000561242 IGHV3-16A0A0C4DH30 117 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 A8MWV9 139 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 GATCO43716 136 aaKnown RBP7.65□□□□□ -1.18
TPM1-229ENST00000561242 SPINK4O60575 86 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 ZNF80P51504 273 aaPredicted RBP7.65□□□□□ -1.18
TPM1-229ENST00000561242 Q6ZTI0 123 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 PRADC1Q9BSG0 188 aa7.65□□□□□ -1.18
TPM1-229ENST00000561242 IGHV4-4A0A075B6R2 117 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 A0A1W2PPQ1 181 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 KRBOX1C9JBD0 128 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 H3BVH4 76 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 M0R381 172 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 PAX4O43316 350 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 LY6G6CO95867 125 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 ARMS2P0C7Q2 107 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 P0DMU3 169 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 FAM231AP0DMU4 169 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 FAM231CP0DMU5 169 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 CCL18P55774 89 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 SSTP61278 116 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 LINC01559Q495D7 138 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 DERL1Q9BUN8 251 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 LY96Q9Y6Y9 160 aa7.64□□□□□ -1.19
TPM1-229ENST00000561242 TRAV4A0A0B4J268 109 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 A8MWL6 223 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 F2Z2F3 143 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 CACNG7P62955 275 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 ADIRFQ15847 76 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 CLLU1Q5K131 121 aa7.63□□□□□ -1.19
TPM1-229ENST00000561242 C11orf72Q8NBR9 251 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms