RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 DPF1Q92782 380 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 LINC00477Q96M19 166 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 IGHV4-4A0A075B6R2 117 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 SRD5A1P18405 259 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 PTTG1IPP53801 180 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 Q8N8P6 123 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 SMIM15Q7Z3B0 74 aa11.05□□□□□ -0.64
CRTC3-210ENST00000560927 SPOCK3Q9BQ16 436 aa11.05□□□□□ -0.64
CRTC3-210ENST00000560927 B4DSR2 109 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 OVOL1O14753 267 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 CFHR3Q02985 330 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 OR1N2Q8NGR9 330 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 ODF1Q14990 250 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
CRTC3-210ENST00000560927 M0R381 172 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 CD5LO43866 347 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 RNASE4P34096 147 aaKnown RBP11.03□□□□□ -0.64
CRTC3-210ENST00000560927 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 C10orf99Q6UWK7 81 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
CRTC3-210ENST00000560927 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CRTC3-210ENST00000560927 A0A0G2JLM5 398 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 CBY3A6NI87 242 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 IGHV4-59P01825 116 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 PRSS1P07477 247 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 NMUP48645 174 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 ACACBO00763 2458 aa11.02□□□□□ -0.64
CRTC3-210ENST00000560927 SMIM17P0DL12 118 aa11.02□□□□□ -0.65
CRTC3-210ENST00000560927 FBN2P35556 2912 aa11.02□□□□□ -0.65
CRTC3-210ENST00000560927 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 FOXC2Q99958 501 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 HHLA3Q9XRX5 114 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 ZANQ9Y493 2812 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 GNRH2O43555 120 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
CRTC3-210ENST00000560927 VAMP3Q15836 100 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 MAPK1IP1LQ8NDC0 245 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 PEF1Q9UBV8 284 aaKnown RBP11.01□□□□□ -0.65
CRTC3-210ENST00000560927 SMPXQ9UHP9 88 aa11.01□□□□□ -0.65
CRTC3-210ENST00000560927 POLQO75417 2590 aa11□□□□□ -0.65
CRTC3-210ENST00000560927 IGKV2D-26A0A0A0MRZ7 120 aa11□□□□□ -0.65
CRTC3-210ENST00000560927 LAGE3Q14657 143 aa11□□□□□ -0.65
CRTC3-210ENST00000560927 USP9YO00507 2555 aaPredicted RBP11□□□□□ -0.65
CRTC3-210ENST00000560927 ASIPP42127 132 aa11□□□□□ -0.65
CRTC3-210ENST00000560927 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
CRTC3-210ENST00000560927 PSMB8P28062 276 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 WFDC12Q8WWY7 111 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 TTTY13Q9BZ97 58 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 PHLDA3Q9Y5J5 127 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 C7orf71A4D174 169 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 APRG1Q8IVJ8 170 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 ZFYVE26Q68DK2 2539 aa10.99□□□□□ -0.65
CRTC3-210ENST00000560927 A1L4Q6 167 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 RNASE3P12724 160 aaKnown RBP10.98□□□□□ -0.65
CRTC3-210ENST00000560927 ADAMTSL5Q6ZMM2 481 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 RASL10AQ92737 203 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
CRTC3-210ENST00000560927 IGKCP01834 107 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 PRB1P04280 392 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 DCANP1Q8TF63 244 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
CRTC3-210ENST00000560927 CENPEQ02224 2701 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 TMEM8BA6NDV4 472 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 GATA3P23771 443 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 A0A096LNT2 108 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
CRTC3-210ENST00000560927 AMMECR1LQ6DCA0 310 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 GTSCR1Q86UQ5 136 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 DPH3P1Q9H4G8 78 aa10.97□□□□□ -0.65
CRTC3-210ENST00000560927 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
CRTC3-210ENST00000560927 K7EMT4 169 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 ATP5LO75964 103 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 DSCR9P59020 149 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 LINC01356Q8N9X3 169 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 OR4C5Q8NGB2 326 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 MYOZ3Q8TDC0 251 aa10.96□□□□□ -0.65
CRTC3-210ENST00000560927 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
CRTC3-210ENST00000560927 DPM2O94777 84 aa10.96□□□□□ -0.66
CRTC3-210ENST00000560927 MGPP08493 103 aa10.96□□□□□ -0.66
CRTC3-210ENST00000560927 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.66
CRTC3-210ENST00000560927 SEC11AP67812 179 aa10.96□□□□□ -0.66
CRTC3-210ENST00000560927 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.66
CRTC3-210ENST00000560927 TMEM160Q9NX00 188 aa10.96□□□□□ -0.66
CRTC3-210ENST00000560927 KLLNB2CW77 178 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 RNF223E7ERA6 249 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 SIVA1O15304 175 aa10.95□□□□□ -0.66
CRTC3-210ENST00000560927 TGFAP01135 160 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms