RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TENM3Q9P273 2699 aa3.98□□□□□ -1.77
ZEB1-220ENST00000560909 ZNF727A8MUV8 499 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 KRBOX1C9JBD0 128 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 K7EN84 100 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 PFN1P07737 140 aaKnown RBP3.97□□□□□ -1.77
ZEB1-220ENST00000560909 CXCL1P09341 107 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 PRB4P10163 310 aaPredicted RBP3.97□□□□□ -1.77
ZEB1-220ENST00000560909 GNG4P50150 75 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 NUTF2P61970 127 aaKnown RBP3.97□□□□□ -1.77
ZEB1-220ENST00000560909 UBE2G1P62253 170 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 RPL23P62829 140 aaKnown RBP3.97□□□□□ -1.77
ZEB1-220ENST00000560909 SMUG1Q53HV7 270 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 DNLZQ5SXM8 178 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 ZNF705AQ6ZN79 300 aaPredicted RBP3.97□□□□□ -1.77
ZEB1-220ENST00000560909 FAM231DQ6ZW35 169 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 PRNTQ86SH4 94 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 C1orf158Q8N1D5 194 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 OR4B1Q8NGF8 309 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 ZC2HC1AQ96GY0 325 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 SGK494Q96LW2 274 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 NEU1Q99519 415 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 ASCL2Q99929 193 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 NDFIP1Q9BT67 221 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 C1QTNF4Q9BXJ3 329 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 NAT8Q9UHE5 227 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 TP53TG1Q9Y2A0 90 aa3.97□□□□□ -1.77
ZEB1-220ENST00000560909 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 C7orf71A4D174 169 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 FABP5P3A8MUU1 101 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 M0R2Z0 102 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 FRMD6-AS1P0C7T7 363 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 RBMY1A1P0DJD3 496 aaKnown RBP3.96□□□□□ -1.78
ZEB1-220ENST00000560909 RBMY1CP0DJD4 496 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 APOC4P55056 127 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 FOXA3P55318 350 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-220ENST00000560909 PNRC1Q12796 327 aaPredicted RBP3.96□□□□□ -1.78
ZEB1-220ENST00000560909 RBMY1FQ15415 496 aaKnown RBP3.96□□□□□ -1.78
ZEB1-220ENST00000560909 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 CT83Q5H943 113 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 FAM162BQ5T6X4 162 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 TMEM256Q8N2U0 113 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 ISOC2Q96AB3 205 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 RNF183Q96D59 192 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 NIPSNAP3BQ9BS92 247 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 TUBA4BQ9H853 241 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 OSTCQ9NRP0 149 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 RPH3ALQ9UNE2 315 aa3.96□□□□□ -1.78
ZEB1-220ENST00000560909 IGKV3D-20A0A0C4DH25 116 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 PGPEP1LA6NFU8 196 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 SMIM9A6NGZ8 99 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 B4DEV8 164 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 F8W036 122 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 H7BYZ3 331 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 SPRY2O43597 315 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 SH2D1AO60880 128 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 INSP01308 110 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 GPX1P07203 203 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 RPL35AP18077 110 aaKnown RBP3.95□□□□□ -1.78
ZEB1-220ENST00000560909 RNASE4P34096 147 aaKnown RBP3.95□□□□□ -1.78
ZEB1-220ENST00000560909 BTN1A1Q13410 526 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 ANXA2RQ3ZCQ2 193 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 Q6ZQT7 251 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 NUDT10Q8NFP7 164 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 PTH2Q96A98 100 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 NUDT11Q96G61 164 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 TM2D3Q9BRN9 247 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 TMEM242Q9NWH2 141 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 XCL2Q9UBD3 114 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 COL7A1Q02388 2944 aa3.95□□□□□ -1.78
ZEB1-220ENST00000560909 TRAV12-2A0A075B6T6 113 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 IGHV1OR15-1A0A075B7D0 117 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 A0A087WWC5 75 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 TRAV12-3A0A0B4J271 114 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 FAM231BA6NCW3 169 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 CA1P00915 261 aaPredicted RBP3.94□□□□□ -1.78
ZEB1-220ENST00000560909 PRB2P02812 416 aaPredicted RBP3.94□□□□□ -1.78
ZEB1-220ENST00000560909 OR5I1Q13606 314 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 ZNF493Q6ZR52 646 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 SBSPONQ8IVN8 264 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 NHLRC2Q8NBF2 726 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 IL17DQ8TAD2 202 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 SFRP2Q96HF1 295 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 KCNS1Q96KK3 526 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 B9D2Q9BPU9 175 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 OVOL2Q9BRP0 275 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 SCRT2Q9NQ03 307 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 V9GYV3 84 aa3.94□□□□□ -1.78
ZEB1-220ENST00000560909 IGHV4-4A0A075B6R2 117 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 IGHV3-16A0A0C4DH30 117 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 ZNF561-AS1K7EIQ3 104 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 PPP1R2P9O14990 202 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 SNAI2O43623 268 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 MT-ND4LP03901 98 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 IGLC6P0CF74 106 aa3.93□□□□□ -1.78
ZEB1-220ENST00000560909 CEBPGP53567 150 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 959.4 ms