RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 WFDC10AQ9H1F0 79 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 PKD1L1Q8TDX9 2849 aa8.3□□□□□ -1.08
SNX1-212ENST00000560861 J3KRW8 73 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 PHOX2AO14813 284 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 RBMY1A1P0DJD3 496 aaKnown RBP8.29□□□□□ -1.08
SNX1-212ENST00000560861 RBMY1CP0DJD4 496 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 CTRLP40313 264 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 RBMY1FQ15415 496 aaKnown RBP8.29□□□□□ -1.08
SNX1-212ENST00000560861 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 DNLZQ5SXM8 178 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
SNX1-212ENST00000560861 TMSB15BA0A087X1C1 80 aa8.28□□□□□ -1.08
SNX1-212ENST00000560861 ORM1P02763 201 aa8.28□□□□□ -1.08
SNX1-212ENST00000560861 TDRG1Q3Y452 100 aa8.28□□□□□ -1.08
SNX1-212ENST00000560861 ANXA2RQ3ZCQ2 193 aa8.28□□□□□ -1.08
SNX1-212ENST00000560861 Q8N1Y9 231 aa8.28□□□□□ -1.08
SNX1-212ENST00000560861 TRAV12-2A0A075B6T6 113 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 XKRY2A2RUG3 117 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 GRIFINA4D1Z8 144 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 SNAI2O43623 268 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 GIG44P09565 113 aaPredicted RBP8.27□□□□□ -1.09
SNX1-212ENST00000560861 FXYD7P58549 80 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 ATP5L2Q7Z4Y8 100 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 GATD1Q8NB37 220 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 SSBP4Q9BWG4 385 aaPredicted RBP8.27□□□□□ -1.09
SNX1-212ENST00000560861 CNFNQ9BYD5 112 aa8.27□□□□□ -1.09
SNX1-212ENST00000560861 AMBPP02760 352 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 RPS10P46783 165 aaKnown RBP8.26□□□□□ -1.09
SNX1-212ENST00000560861 PRR31Q5SQ13 230 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
SNX1-212ENST00000560861 RASL11AQ6T310 242 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 TMEM136Q6ZRR5 245 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 LINC00467Q9BRT7 94 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 SCRT2Q9NQ03 307 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 MUC4Q99102 2169 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 DNAH3Q8TD57 4116 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
SNX1-212ENST00000560861 SPINK4O60575 86 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 OR5AL1P0C617 328 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 ARMS2P0C7Q2 107 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 EGFEM1PQ0D2K5 195 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 COX19Q49B96 90 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 MUC21Q5SSG8 566 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 STHQ8IWL8 128 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 DEFB125Q8N687 156 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
SNX1-212ENST00000560861 IGHV4-4A0A075B6R2 117 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 IGHV1OR15-1A0A075B7D0 117 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 A0A1B0GUT8 65 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 GNRH2O43555 120 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 RNASE3P12724 160 aaKnown RBP8.24□□□□□ -1.09
SNX1-212ENST00000560861 WDR73Q6P4I2 378 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 C1orf158Q8N1D5 194 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 GNB1LQ9BYB4 327 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 NOTCH1P46531 2555 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 MGAM2Q2M2H8 2515 aa8.24□□□□□ -1.09
SNX1-212ENST00000560861 IGHV3-16A0A0C4DH30 117 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 NXPH4O95158 308 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 INSP01308 110 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 TRGC2P03986 189 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 KRTAP10-11P60412 298 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 HBBP68871 147 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 OXLD1Q5BKU9 147 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 MORN3Q6PF18 240 aaPredicted RBP8.23□□□□□ -1.09
SNX1-212ENST00000560861 GTSCR1Q86UQ5 136 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 KCNS1Q96KK3 526 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 C9orf85Q96MD7 179 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 NAGKQ9UJ70 344 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 TP53TG3Q9ULZ0 132 aa8.23□□□□□ -1.09
SNX1-212ENST00000560861 A0A1B0GW15 77 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 F2Z2F3 143 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 H3BVH4 76 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 MT-ND6P03923 174 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 ASIPP42127 132 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 RIGQ13278 110 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 FRZBQ92765 325 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 XCL2Q9UBD3 114 aa8.22□□□□□ -1.09
SNX1-212ENST00000560861 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 SNURFLB1AK76 121 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 RPL35AP18077 110 aaKnown RBP8.21□□□□□ -1.1
SNX1-212ENST00000560861 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 ZNF493Q6ZR52 646 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
SNX1-212ENST00000560861 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
SNX1-212ENST00000560861 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
SNX1-212ENST00000560861 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
SNX1-212ENST00000560861 CAMPP49913 170 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms