RNA–Protein interactions for RNA: ENST00000560615.5

TPM1-224, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-224ENST00000560615 CIDEAO60543 219 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 H2BFSP57053 126 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 FRZBQ92765 325 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 SMIM3Q9BZL3 60 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
TPM1-224ENST00000560615 SERTM2A0A1B0GWG4 89 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 PSCAO43653 123 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 CRYGDP07320 174 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 PPT1P50897 306 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 NHLRC2Q8NBF2 726 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
TPM1-224ENST00000560615 IGHV3-16A0A0C4DH30 117 aa12.56□□□□□ -0.4
TPM1-224ENST00000560615 K7EQM0 130 aa12.56□□□□□ -0.4
TPM1-224ENST00000560615 PFN1P07737 140 aaKnown RBP12.56□□□□□ -0.4
TPM1-224ENST00000560615 TIRAPP58753 221 aa12.56□□□□□ -0.4
TPM1-224ENST00000560615 TRAV8-6A0A0B4J262 113 aa12.55□□□□□ -0.4
TPM1-224ENST00000560615 GNRH2O43555 120 aa12.55□□□□□ -0.4
TPM1-224ENST00000560615 ASB13Q8WXK3 278 aa12.55□□□□□ -0.4
TPM1-224ENST00000560615 PRADC1Q9BSG0 188 aa12.55□□□□□ -0.4
TPM1-224ENST00000560615 DNAH5Q8TE73 4624 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 IGHV3-38A0A0C4DH36 116 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
TPM1-224ENST00000560615 GCSHP23434 173 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 OR10G9Q8NGN4 311 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 OR10G7Q8NGN6 311 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 SH3BGRL3Q9H299 93 aa12.54□□□□□ -0.4
TPM1-224ENST00000560615 F6UZH7 168 aa12.53□□□□□ -0.4
TPM1-224ENST00000560615 TYMSP04818 313 aa12.53□□□□□ -0.4
TPM1-224ENST00000560615 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
TPM1-224ENST00000560615 TAAR5O14804 337 aa12.52□□□□□ -0.41
TPM1-224ENST00000560615 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.41
TPM1-224ENST00000560615 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
TPM1-224ENST00000560615 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
TPM1-224ENST00000560615 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.41
TPM1-224ENST00000560615 XGP55808 180 aa12.51□□□□□ -0.41
TPM1-224ENST00000560615 RHOHQ15669 191 aa12.51□□□□□ -0.41
TPM1-224ENST00000560615 LINC01556Q5JQF7 62 aa12.51□□□□□ -0.41
TPM1-224ENST00000560615 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
TPM1-224ENST00000560615 NTN5Q8WTR8 489 aaPredicted RBP12.51□□□□□ -0.41
TPM1-224ENST00000560615 APOBP04114 4563 aaKnown RBP12.5□□□□□ -0.41
TPM1-224ENST00000560615 TRAV8-1A0A0A6YYK1 113 aa12.5□□□□□ -0.41
TPM1-224ENST00000560615 TRBV6-4A0A1B0GX49 114 aa12.5□□□□□ -0.41
TPM1-224ENST00000560615 CDC34P49427 236 aaPredicted RBP12.5□□□□□ -0.41
TPM1-224ENST00000560615 RAB2AP61019 212 aa12.5□□□□□ -0.41
TPM1-224ENST00000560615 IFITM3Q01628 133 aa12.5□□□□□ -0.41
TPM1-224ENST00000560615 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
TPM1-224ENST00000560615 IGLV5-52A0A0A0MRZ9 124 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 LOC100131303A0A0U1RQF7 123 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 EIF3GO75821 320 aaKnown RBP eCLIP12.49□□□□□ -0.41
TPM1-224ENST00000560615 MBP02144 154 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 KRTAP10-1P60331 282 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 Q5VSD8 79 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 TVP23CQ96ET8 276 aa12.49□□□□□ -0.41
TPM1-224ENST00000560615 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 FAM229AH3BQW9 127 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 HMGB3O15347 200 aaKnown RBP12.48□□□□□ -0.41
TPM1-224ENST00000560615 ARL14EPLP0DKL9 152 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 GNG5P63218 68 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 SLC25A29Q8N8R3 303 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 WFDC1Q9HC57 220 aa12.48□□□□□ -0.41
TPM1-224ENST00000560615 RS1O15537 224 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 TCRAP04437 139 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 STAG3L2P0CL84 134 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 STAG3L3P0CL85 134 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 MGST1P10620 155 aaKnown RBP12.47□□□□□ -0.41
TPM1-224ENST00000560615 SMUG1Q53HV7 270 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 SAPCD1Q5SSQ6 148 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 LELP1Q5T871 98 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 OR2G3Q8NGZ4 309 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 PTH2Q96A98 100 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 PSG8Q9UQ74 426 aa12.47□□□□□ -0.41
TPM1-224ENST00000560615 GCGP01275 180 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 SERF2P84101 59 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 PSMG3Q9BT73 122 aaPredicted RBP12.46□□□□□ -0.41
TPM1-224ENST00000560615 TMEM70Q9BUB7 260 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 TM2D2Q9BX73 214 aa12.46□□□□□ -0.41
TPM1-224ENST00000560615 CXorf1O96002 111 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 GCHFRP30047 84 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 FLI1Q01543 452 aaPredicted RBP12.45□□□□□ -0.42
TPM1-224ENST00000560615 HSD17B11Q8NBQ5 300 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 ATP6V0E2Q8NHE4 81 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 RAB24Q969Q5 203 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 GTSF1LQ9H1H1 148 aa12.45□□□□□ -0.42
TPM1-224ENST00000560615 S100A4P26447 101 aaKnown RBP12.44□□□□□ -0.42
TPM1-224ENST00000560615 SUMO1P63165 101 aaKnown RBP12.44□□□□□ -0.42
TPM1-224ENST00000560615 CYB561D1Q8N8Q1 229 aa12.44□□□□□ -0.42
TPM1-224ENST00000560615 C9orf85Q96MD7 179 aa12.44□□□□□ -0.42
TPM1-224ENST00000560615 ACTR3CQ9C0K3 210 aaPredicted RBP12.44□□□□□ -0.42
TPM1-224ENST00000560615 Q9HAA7 133 aa12.44□□□□□ -0.42
TPM1-224ENST00000560615 EPDR1Q9UM22 224 aa12.44□□□□□ -0.42
TPM1-224ENST00000560615 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
TPM1-224ENST00000560615 LAGE3Q14657 143 aa12.43□□□□□ -0.42
TPM1-224ENST00000560615 PRNTQ86SH4 94 aa12.43□□□□□ -0.42
TPM1-224ENST00000560615 TMEM75Q8N9X5 138 aa12.43□□□□□ -0.42
TPM1-224ENST00000560615 SUN5Q8TC36 379 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms