RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FLI1Q01543 452 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-219ENST00000560483 ZNF415Q09FC8 603 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 TMEM183BQ1AE95 376 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 PRR9Q5T870 116 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 TMEM183AQ8IXX5 376 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 ATG101Q9BSB4 218 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 NKX6-2Q9C056 277 aaPredicted RBP5.7□□□□□ -1.5
LRRC28-219ENST00000560483 GSN-AS1Q9NRJ2 163 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 EPDR1Q9UM22 224 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 PSG8Q9UQ74 426 aa5.7□□□□□ -1.5
LRRC28-219ENST00000560483 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 TRAV21A0A0B4J279 112 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 PEX7O00628 323 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 NUDT3O95989 172 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 GCGP01275 180 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 AKR1C3P42330 323 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 TCTAP57738 103 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 LGALSLQ3ZCW2 172 aaPredicted RBP5.69□□□□□ -1.5
LRRC28-219ENST00000560483 SMUG1Q53HV7 270 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 DPPA3Q6W0C5 159 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 Q6ZQT7 251 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 SLC51BQ86UW2 128 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 ZFAND2AQ8N6M9 145 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 RNASE8Q8TDE3 154 aaKnown RBP5.69□□□□□ -1.5
LRRC28-219ENST00000560483 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 C8orf49Q96NF6 230 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 TP53TG3Q9ULZ0 132 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 NACAE9PAV3 2078 aa5.69□□□□□ -1.5
LRRC28-219ENST00000560483 TRBV7-9A0A0J9YWB2 115 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 FAM74A7A6NL05 159 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 PAGE4O60829 102 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 ZNF324O75467 553 aaPredicted RBP5.68□□□□□ -1.5
LRRC28-219ENST00000560483 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 SAPCD1Q5SSQ6 148 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 CFAP161Q6P656 301 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 TMEM88Q6PEY1 159 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 HIST1H2BAQ96A08 127 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 FAM19A4Q96LR4 140 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 LINC00479Q96M42 142 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 LYSTQ99698 3801 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 SDF2L1Q9HCN8 221 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 MRPL16Q9NX20 251 aaKnown RBP5.68□□□□□ -1.5
LRRC28-219ENST00000560483 GNG13Q9P2W3 67 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
LRRC28-219ENST00000560483 RYR3Q15413 4870 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 A0A0J9YY99 117 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 A0A1B0GVG6 124 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 FBLL1A6NHQ2 334 aaKnown RBP5.67□□□□□ -1.5
LRRC28-219ENST00000560483 IFNA1P01562 189 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 PLA2G1BP04054 148 aaKnown RBP5.67□□□□□ -1.5
LRRC28-219ENST00000560483 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
LRRC28-219ENST00000560483 RAB5CP51148 216 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 NKX2-5P52952 324 aaPredicted RBP5.67□□□□□ -1.5
LRRC28-219ENST00000560483 ANXA2RQ3ZCQ2 193 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 Q6ZTI0 123 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 SUN5Q8TC36 379 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 APLNQ9ULZ1 77 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 KLF12Q9Y4X4 402 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 ARL2-SNX15V9GYD0 113 aa5.67□□□□□ -1.5
LRRC28-219ENST00000560483 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 PLAC8L1A1L4L8 177 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 C9JCJ5 164 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 ORM1P02763 201 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 P0DMU3 169 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 FAM231AP0DMU4 169 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 FAM231CP0DMU5 169 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 TCL1AP56279 114 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 Q6AWC8 147 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 LGALS9CQ6DKI2 356 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 NHLRC2Q8NBF2 726 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 MBD3L1Q8WWY6 194 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 FMC1Q96HJ9 113 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 RYR2Q92736 4967 aa5.66□□□□□ -1.5
LRRC28-219ENST00000560483 DYNC2H1Q8NCM8 4307 aaKnown RBP5.65□□□□□ -1.5
LRRC28-219ENST00000560483 TRAV26-1A0A087WT03 109 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 TRGV4A0A0C4DH28 118 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 M0R036 132 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 GNRH2O43555 120 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 PFN1P07737 140 aaKnown RBP5.65□□□□□ -1.5
LRRC28-219ENST00000560483 SULT1A2P50226 295 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 DAZ2Q13117 558 aaKnown RBP5.65□□□□□ -1.5
LRRC28-219ENST00000560483 IBA57Q5T440 356 aaKnown RBP5.65□□□□□ -1.5
LRRC28-219ENST00000560483 ALKAL2Q6UX46 152 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 Q86TA4 180 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 C9orf62Q8N4C0 152 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 C15orf53Q8NAA6 179 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 TVP23CQ96ET8 276 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 FAM210BQ96KR6 192 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 LINC00467Q9BRT7 94 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 MANBALQ9NQG1 85 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 MDFICQ9P1T7 246 aa5.65□□□□□ -1.5
LRRC28-219ENST00000560483 HYDINQ4G0P3 5121 aa5.65□□□□□ -1.51
LRRC28-219ENST00000560483 TMSB15BA0A087X1C1 80 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms