RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TENM3Q9P273 2699 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 PHOX2AO14813 284 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 TYMSP04818 313 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 CT45A10P0DMU9 189 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 ZNF138P52744 262 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 FAM3BP58499 235 aaPredicted RBP10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 ERVFC1-1P60608 527 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 UBE2G1P62253 170 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 KCNIP4Q6PIL6 250 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 ZFP82Q8N141 532 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 C1orf158Q8N1D5 194 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 ZNF492Q9P255 531 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 RPH3ALQ9UNE2 315 aa10.11□□□□□ -0.79
PKNOX1-209ENST00000560448 IGHV4-28A0A0C4DH34 117 aa10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 KLLNB2CW77 178 aa10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 Q86TA4 180 aa10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 TMEM75Q8N9X5 138 aa10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 NHLRC2Q8NBF2 726 aa10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
PKNOX1-209ENST00000560448 TRAV9-1A0A075B6T8 112 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 IGKV2-40A0A087WW87 121 aaPredicted RBP10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 A0A1W2PPQ1 181 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 IGKV2D-40P01614 121 aaPredicted RBP10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 MGST1P10620 155 aaKnown RBP10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 GOLT1AQ6ZVE7 132 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 C11orf45Q8TAV5 145 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 SGK494Q96LW2 274 aa10.09□□□□□ -0.79
PKNOX1-209ENST00000560448 TRAV12-2A0A075B6T6 113 aa10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 IBA57Q5T440 356 aaKnown RBP10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 GFI1BQ5VTD9 330 aa10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 TMEM183AQ8IXX5 376 aa10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 BTF3L4Q96K17 158 aa10.08□□□□□ -0.8
PKNOX1-209ENST00000560448 TRAV8-1A0A0A6YYK1 113 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 C7orf71A4D174 169 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 NUPR2A6NF83 97 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 TRGC2P03986 189 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 GPX1P07203 203 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 ERCC8Q13216 396 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 C16orf74Q96GX8 76 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 LINC01587Q99440 93 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 VGLL1Q99990 258 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 LINC00467Q9BRT7 94 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 BIN3Q9NQY0 253 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 C19orf71A6NCJ1 209 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 SPART-AS1P0CW21 52 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 TMEM263Q8WUH6 116 aaKnown RBP10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 PSG8Q9UQ74 426 aa10.07□□□□□ -0.8
PKNOX1-209ENST00000560448 SMIM27A0A1W2PRY6 76 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 GATCO43716 136 aaKnown RBP10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 PRNTQ86SH4 94 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 FRZBQ92765 325 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 ZFP30Q9Y2G7 519 aa10.06□□□□□ -0.8
PKNOX1-209ENST00000560448 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
PKNOX1-209ENST00000560448 ZNF705GA8MUZ8 300 aaPredicted RBP10.05□□□□□ -0.8
PKNOX1-209ENST00000560448 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
PKNOX1-209ENST00000560448 SAPCD1Q5SSQ6 148 aa10.05□□□□□ -0.8
PKNOX1-209ENST00000560448 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BKO60814 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BJP06899 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BOP23527 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BBP33778 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BDP58876 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BCP62807 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST2H2BEQ16778 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 Q6AWC8 147 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 PRR27Q6MZM9 219 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BHQ93079 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BNQ99877 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 HIST1H2BMQ99879 126 aa10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
PKNOX1-209ENST00000560448 DEFB4AO15263 64 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 PRB4P10163 310 aaPredicted RBP10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 TCTAP57738 103 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 ANXA2RQ3ZCQ2 193 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 CT83Q5H943 113 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 Q8TAT8 98 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 ZC2HC1AQ96GY0 325 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 DKK2Q9UBU2 259 aa10.03□□□□□ -0.8
PKNOX1-209ENST00000560448 DNAH7Q8WXX0 4024 aa10.02□□□□□ -0.81
PKNOX1-209ENST00000560448 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
PKNOX1-209ENST00000560448 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms