RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
SNRPA1-210ENST00000560383 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 FAM74A7A6NL05 159 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 UMAD1C9J7I0 102 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 F6UZH7 168 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 FGF8P55075 233 aaPredicted RBP10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 TMEM183AQ8IXX5 376 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 RASL10AQ92737 203 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 MAP1LC3BQ9GZQ8 125 aa10.55□□□□□ -0.72
SNRPA1-210ENST00000560383 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 KANTRA0A1W2PQU2 76 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 LCE2BO14633 110 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 FHITP49789 147 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 ZNF80P51504 273 aaPredicted RBP10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 CCL18P55774 89 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 MRPL16Q9NX20 251 aaKnown RBP10.54□□□□□ -0.72
SNRPA1-210ENST00000560383 A0A0J9YY99 117 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 GNRH2O43555 120 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 UBE2G2P60604 165 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 PRNTQ86SH4 94 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 ZNRF2Q8NHG8 242 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 HIST1H2BAQ96A08 127 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 LINC00588Q9Y4M8 146 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 RYR1P21817 5038 aa10.53□□□□□ -0.72
SNRPA1-210ENST00000560383 MUC4Q99102 2169 aa10.52□□□□□ -0.72
SNRPA1-210ENST00000560383 PEX7O00628 323 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 GCGP01275 180 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 IFNA7P01567 189 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 TYMSP04818 313 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 PFN1P07737 140 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 EIF5AP63241 154 aaKnown RBP10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 SMUG1Q53HV7 270 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 TMUB2Q71RG4 321 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 TCTE3Q8IZS6 198 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 STOML3Q8TAV4 291 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 TCEAL7Q9BRU2 100 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 SDF2L1Q9HCN8 221 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
SNRPA1-210ENST00000560383 A0A096LPF7 62 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 SLAQ13239 276 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 FHL2Q14192 279 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 DPPA3Q6W0C5 159 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 COX8CQ7Z4L0 72 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
SNRPA1-210ENST00000560383 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 M0R2P5 195 aa10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 TPT1P13693 172 aaKnown RBP10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 PPT1P50897 306 aa10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
SNRPA1-210ENST00000560383 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 NBDYA0A0U1RRE5 68 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 A0A1B0GVG6 124 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 PFDN1O60925 122 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 IGHV3-53P01767 116 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 CRYBA4P53673 196 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 ESRGQ1W209 222 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 Q86TA4 180 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 FAM213BQ8TBF2 198 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 SFT2D1Q8WV19 159 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
SNRPA1-210ENST00000560383 PAX4O43316 350 aa10.48□□□□□ -0.73
SNRPA1-210ENST00000560383 LGALSLQ3ZCW2 172 aaPredicted RBP10.48□□□□□ -0.73
SNRPA1-210ENST00000560383 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
SNRPA1-210ENST00000560383 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
SNRPA1-210ENST00000560383 ZFP30Q9Y2G7 519 aa10.48□□□□□ -0.73
SNRPA1-210ENST00000560383 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 C1QBP02746 253 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 SFTA3P0C7M3 94 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 C6orf223Q8N319 242 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 PTH2Q96A98 100 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 FMC1Q96HJ9 113 aa10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 MRPS16Q9Y3D3 137 aaKnown RBP10.47□□□□□ -0.73
SNRPA1-210ENST00000560383 IGKV3D-20A0A0C4DH25 116 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 FABP5P3A8MUU1 101 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 J3QL48 77 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 PAGE4O60829 102 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 H2AFB1P0C5Y9 115 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 C4orf48Q5BLP8 95 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 CST9LP1Q5W188 147 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 Q9H8V8 135 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 ICOSQ9Y6W8 199 aa10.46□□□□□ -0.73
SNRPA1-210ENST00000560383 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
SNRPA1-210ENST00000560383 HSPG2P98160 4391 aa10.45□□□□□ -0.74
SNRPA1-210ENST00000560383 TRAV1-1A0A0B4J248 108 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms