RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
RABGGTA-215ENST00000560207 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
RABGGTA-215ENST00000560207 PLAC8L1A1L4L8 177 aa8.62□□□□□ -1.03
RABGGTA-215ENST00000560207 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
RABGGTA-215ENST00000560207 PIK3CD-AS1Q5SR53 167 aa8.62□□□□□ -1.03
RABGGTA-215ENST00000560207 LY96Q9Y6Y9 160 aa8.62□□□□□ -1.03
RABGGTA-215ENST00000560207 CIDEAO60543 219 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 CXCL1P09341 107 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 C12orf74Q32Q52 190 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 CENPWQ5EE01 88 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 TOR2AQ5JU69 321 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 MUC21Q5SSG8 566 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 DNLZQ5SXM8 178 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 CEMP1Q6PRD7 247 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 C11orf72Q8NBR9 251 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 PHLDA1Q8WV24 401 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 PTH2Q96A98 100 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 ZC2HC1AQ96GY0 325 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 NOP10Q9NPE3 64 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 NAGKQ9UJ70 344 aa8.61□□□□□ -1.03
RABGGTA-215ENST00000560207 XKRY2A2RUG3 117 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 SPINK4O60575 86 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 ORM1P02763 201 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 ATP5G1P05496 136 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 ZNF80P51504 273 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 CLLU1Q5K131 121 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 GSN-AS1Q9NRJ2 163 aa8.6□□□□□ -1.03
RABGGTA-215ENST00000560207 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 RAB19A4D1S5 217 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 B4DEV8 164 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 M0R2P5 195 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 SH2D1AO60880 128 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 TYMSP04818 313 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 ASIPP42127 132 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 RPS20P60866 119 aaKnown RBP8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 SLAQ13239 276 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 RASL10AQ92737 203 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 PARLQ9H300 379 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 IL36BQ9NZH7 164 aa8.59□□□□□ -1.03
RABGGTA-215ENST00000560207 TRGV2A0A075B6R0 118 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 DEFB130BP0DP73 79 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 DEFB130AP0DP74 79 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 Q6ZTC4 211 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
RABGGTA-215ENST00000560207 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 KRBOX1C9JBD0 128 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 GNRH2O43555 120 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 SRP19P09132 144 aaKnown RBP8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 CRIP1P50238 77 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 OR5I1Q13606 314 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 SYT8Q8NBV8 401 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 SMIM7Q9BQ49 75 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 MDFICQ9P1T7 246 aa8.57□□□□□ -1.04
RABGGTA-215ENST00000560207 IGKV3D-20A0A0C4DH25 116 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 H3BNG1 76 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 P01737 135 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 PRM2P04554 102 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 C15orf53Q8NAA6 179 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 C9orf85Q96MD7 179 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 MUC4Q99102 2169 aa8.56□□□□□ -1.04
RABGGTA-215ENST00000560207 TRBV20OR9-2A0A075B6H5 130 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 GAGE12BA1L429 117 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 GAGE7O76087 117 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 IGLV2-8P01709 118 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 GAGE12FP0CL80 117 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 GAGE12GP0CL81 117 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 GAGE12IP0CL82 117 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 SOHLH1Q5JUK2 328 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 UQCC3Q6UW78 93 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 Q6ZQT7 251 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 Q6ZTI0 123 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 FAM231DQ6ZW35 169 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
RABGGTA-215ENST00000560207 A0A1W2PPQ1 181 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 C19orf71A6NCJ1 209 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 A8MWV9 139 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 F2Z2F3 143 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 M0R036 132 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 OR5AL1P0C617 328 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 CEBPGP53567 150 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 IFITM2Q01629 132 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 ZNF876PQ49A33 203 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 ZFAND6Q6FIF0 208 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 OCC1Q8TAD7 63 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 PHLDA3Q9Y5J5 127 aa8.54□□□□□ -1.04
RABGGTA-215ENST00000560207 TRAV4A0A0B4J268 109 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms