RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 A0A087WW49 117 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 IGKV3D-20A0A0C4DH25 116 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 M0R2Z0 102 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 ZNF705DP0CH99 300 aaPredicted RBP13.38□□□□□ -0.27
SNX1-208ENST00000559844 ZNF705BP0CI00 300 aaPredicted RBP13.38□□□□□ -0.27
SNX1-208ENST00000559844 FAM19A2Q8N3H0 131 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 TSSC4Q9Y5U2 329 aaPredicted RBP13.38□□□□□ -0.27
SNX1-208ENST00000559844 C18orf65Q6ZTR6 163 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 ZNF747Q9BV97 191 aa13.38□□□□□ -0.27
SNX1-208ENST00000559844 LINC00614P0C842 121 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 RAB4AP20338 218 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 KRTDAPP60985 99 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 DCANP1Q8TF63 244 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 TMEM191AQ9H0A3 160 aa13.37□□□□□ -0.27
SNX1-208ENST00000559844 TRAV21A0A0B4J279 112 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 EDN2P20800 178 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
SNX1-208ENST00000559844 SYNJ2BPP57105 145 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 FAM19A4Q96LR4 140 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 C11orf21Q9P2W6 132 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 U3KQK5 164 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 NSUN5P1Q3KNT7 163 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 ZNF664Q8N3J9 261 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 ZFAND2AQ8N6M9 145 aa13.36□□□□□ -0.27
SNX1-208ENST00000559844 M0QZ24 198 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 CD33P20138 364 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 AMN1Q8IY45 258 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 C4orf3Q8WVX3 66 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 PRO1933Q9H354 126 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 WNK1Q9H4A3 2382 aa13.35□□□□□ -0.27
SNX1-208ENST00000559844 ADARB2-AS1A8MUL3 147 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 SSTP61278 116 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 NDUFA11Q86Y39 141 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 ORMDL3Q8N138 153 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 MS4A6AQ9H2W1 248 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 MUC21A0A0G2JKD1 596 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 MUC21A0A140T8X8 626 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 MUC21Q5SSG8 566 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 PRR9Q5T870 116 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 SHISA2Q6UWI4 295 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 TEX43Q6ZNM6 134 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
SNX1-208ENST00000559844 OR5AL1P0C617 328 aa13.33□□□□□ -0.28
SNX1-208ENST00000559844 C3orf79P0CE67 100 aa13.33□□□□□ -0.28
SNX1-208ENST00000559844 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
SNX1-208ENST00000559844 CACNG7P62955 275 aa13.33□□□□□ -0.28
SNX1-208ENST00000559844 MRPL51Q4U2R6 128 aaKnown RBP13.33□□□□□ -0.28
SNX1-208ENST00000559844 PRELID3AQ96N28 172 aa13.33□□□□□ -0.28
SNX1-208ENST00000559844 C2orf70A6NJV1 201 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 D6R8Y8 96 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 F6UB75 175 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 LINC01619G3V211 115 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 KRTAP21-3Q3LHN1 58 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 SNAI2O43623 268 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 DDTP30046 118 aa13.32□□□□□ -0.28
SNX1-208ENST00000559844 IGHV1-24A0A0C4DH33 117 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 K7EQG2 157 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 PPBPP02775 128 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 DEFB1P60022 68 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 FA2HQ7L5A8 372 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 SMIM15Q7Z3B0 74 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 PRSS3P2Q8NHM4 247 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 DUX3Q96PT4 197 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 SELENOKQ9Y6D0 94 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 IGHV4-4A0A075B6R2 117 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 CSN3P07498 182 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 CKS2P33552 79 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 Q8N976 141 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 DPF1Q92782 380 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 ODF3Q96PU9 254 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 PEMTQ9UBM1 199 aa13.31□□□□□ -0.28
SNX1-208ENST00000559844 J3KRW8 73 aa13.3□□□□□ -0.28
SNX1-208ENST00000559844 BTF3P20290 206 aaKnown RBP13.3□□□□□ -0.28
SNX1-208ENST00000559844 OR11H1Q8NG94 326 aa13.3□□□□□ -0.28
SNX1-208ENST00000559844 AP5S1Q9NUS5 200 aa13.3□□□□□ -0.28
SNX1-208ENST00000559844 MSRB1Q9NZV6 116 aa13.3□□□□□ -0.28
SNX1-208ENST00000559844 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 MED14OSP0DP75 135 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 RNASE4P34096 147 aaKnown RBP13.29□□□□□ -0.28
SNX1-208ENST00000559844 TFPI2P48307 235 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 RAX2Q96IS3 184 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 LAMTOR2Q9Y2Q5 125 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 LEPP41159 167 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 OR1N2Q8NGR9 330 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 RNF185Q96GF1 192 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 VAMP8Q9BV40 100 aa13.29□□□□□ -0.28
SNX1-208ENST00000559844 KLLNB2CW77 178 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 ZNF688P0C7X2 276 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 ASIPP42127 132 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 SLURP1P55000 103 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 DEFA6Q01524 100 aa13.28□□□□□ -0.28
SNX1-208ENST00000559844 SPANXN1Q5VSR9 72 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms