RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 FAM159AQ6UWV7 190 aa12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 DPPA3Q6W0C5 159 aa12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 MSRB1Q9NZV6 116 aa12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 M0R2P5 195 aa12.63□□□□□ -0.39
CDC42BPB-206ENST00000559790 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
CDC42BPB-206ENST00000559790 IGLV2-11P01706 119 aa12.62□□□□□ -0.39
CDC42BPB-206ENST00000559790 ORM1P02763 201 aa12.62□□□□□ -0.39
CDC42BPB-206ENST00000559790 PQLC2Q6ZP29 291 aa12.62□□□□□ -0.39
CDC42BPB-206ENST00000559790 NFE4Q86UQ8 179 aa12.62□□□□□ -0.39
CDC42BPB-206ENST00000559790 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
CDC42BPB-206ENST00000559790 LRCOL1A6NCL2 159 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 IFNA5P01569 189 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 PET100P0DJ07 73 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 TIRAPP58753 221 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 SUN5Q8TC36 379 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
CDC42BPB-206ENST00000559790 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 C9JCJ5 164 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 SSNA1O43805 119 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 TMEM75Q8N9X5 138 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 OR4C5Q8NGB2 326 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 TREM1Q9NP99 234 aa12.6□□□□□ -0.39
CDC42BPB-206ENST00000559790 EPM2AB3EWF7 344 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 GGTLC3B5MD39 225 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 K7EP13 123 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 STAG3L2P0CL84 134 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 ACOT6Q3I5F7 207 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 TXNDC17Q9BRA2 123 aa12.59□□□□□ -0.39
CDC42BPB-206ENST00000559790 CRYGDP07320 174 aa12.58□□□□□ -0.4
CDC42BPB-206ENST00000559790 SLC25A29Q8N8R3 303 aa12.58□□□□□ -0.4
CDC42BPB-206ENST00000559790 OR2G3Q8NGZ4 309 aa12.58□□□□□ -0.4
CDC42BPB-206ENST00000559790 CMTM2Q8TAZ6 248 aa12.58□□□□□ -0.4
CDC42BPB-206ENST00000559790 RS1O15537 224 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 TCRAP04437 139 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 HAMPP81172 84 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 LINC01556Q5JQF7 62 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 Q5VSD8 79 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 CFAP126Q5VTH2 177 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 OR10G9Q8NGN4 311 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 OR10G7Q8NGN6 311 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
CDC42BPB-206ENST00000559790 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 EVI2AP22794 236 aa12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 CDC34P49427 236 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 Q8N3U1 123 aa12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 ALG5Q9Y673 324 aa12.56□□□□□ -0.4
CDC42BPB-206ENST00000559790 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 EREGO14944 169 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 GCHFRP30047 84 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 Q5BKY6 102 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 C5orf17Q8NAS9 161 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 HSD17B11Q8NBQ5 300 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 RAB24Q969Q5 203 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
CDC42BPB-206ENST00000559790 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 PGPEP1LA6NFU8 196 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 ATP6V0CP27449 155 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 ZNF506Q5JVG8 444 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 Q6ZSN1 163 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 AQP10Q96PS8 301 aa12.54□□□□□ -0.4
CDC42BPB-206ENST00000559790 IBA57-AS1B1ANH7 110 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 GCGP01275 180 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 WFDC2Q14508 124 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 ZNF876PQ49A33 203 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 PSMG3Q9BT73 122 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 Q9UF83 564 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
CDC42BPB-206ENST00000559790 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 GCSHP23434 173 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 DEFA1P59665 94 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 DEFA3P59666 94 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 SH2D6Q7Z4S9 175 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 PTH2Q96A98 100 aa12.52□□□□□ -0.41
CDC42BPB-206ENST00000559790 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
CDC42BPB-206ENST00000559790 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
CDC42BPB-206ENST00000559790 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
CDC42BPB-206ENST00000559790 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 RNF222A6NCQ9 220 aa12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 SMR3BP02814 79 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 PPT1P50897 306 aa12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 RHOHQ15669 191 aa12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
CDC42BPB-206ENST00000559790 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms