RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TMEM75Q8N9X5 138 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 A0A096LPF7 62 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 A0A1B0GVY2 172 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 TYMSP04818 313 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 FGF8P55075 233 aaPredicted RBP7.59□□□□□ -1.19
SPG11-216ENST00000559347 FLI1Q01543 452 aaPredicted RBP7.59□□□□□ -1.19
SPG11-216ENST00000559347 OR11H4Q8NGC9 324 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 C8orf49Q96NF6 230 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 SPXQ9BT56 116 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
SPG11-216ENST00000559347 DYNC1H1Q14204 4646 aaKnown RBP7.59□□□□□ -1.19
SPG11-216ENST00000559347 IGHV3-16A0A0C4DH30 117 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 NBDYA0A0U1RRE5 68 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 MAP1LC3B2A6NCE7 125 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 PRSS29PA6NIE9 313 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 HMSDA8MTL9 139 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 IGHV3-53P01767 116 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 ZNF80P51504 273 aaPredicted RBP7.58□□□□□ -1.2
SPG11-216ENST00000559347 UBE2G2P60604 165 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 KCNS1Q96KK3 526 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 UPK3BQ9BT76 320 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 MAP1LC3BQ9GZQ8 125 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 SDF2L1Q9HCN8 221 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 PSG8Q9UQ74 426 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 HERC2O95714 4834 aa7.58□□□□□ -1.2
SPG11-216ENST00000559347 FBLL1A6NHQ2 334 aaKnown RBP7.57□□□□□ -1.2
SPG11-216ENST00000559347 FAM74A7A6NL05 159 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 BCL2L11O43521 198 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 GNRH2O43555 120 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 GCGP01275 180 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 SFTA3P0C7M3 94 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 FHL2Q14192 279 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 ESRGQ1W209 222 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 ZFP69Q49AA0 526 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 PRNTQ86SH4 94 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 Q86TA4 180 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 RASL10AQ92737 203 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 C11orf21Q9P2W6 132 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
SPG11-216ENST00000559347 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
SPG11-216ENST00000559347 PEX7O00628 323 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 PAX4O43316 350 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 PFN1P07737 140 aaKnown RBP7.56□□□□□ -1.2
SPG11-216ENST00000559347 FHITP49789 147 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 CRYBA4P53673 196 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 SMUG1Q53HV7 270 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 SOHLH1Q5JUK2 328 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 C1orf134Q5TEV5 83 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 ZNF479Q96JC4 524 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 LINC00479Q96M42 142 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 KRTAP1-5Q9BYS1 174 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 ICOSQ9Y6W8 199 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 ARL2-SNX15V9GYD0 113 aa7.56□□□□□ -1.2
SPG11-216ENST00000559347 KIAA1109Q2LD37 5005 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 TRAV34A0A0B4J273 112 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 A0A0D9SG52 128 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 KANTRA0A1W2PQU2 76 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 M0R2P5 195 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 IFNA7P01567 189 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 SEC11BP0C7V7 166 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 SLAQ13239 276 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 SAPCD1Q5SSQ6 148 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 ZNF471Q9BX82 626 aaPredicted RBP7.55□□□□□ -1.2
SPG11-216ENST00000559347 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
SPG11-216ENST00000559347 HHLA3Q9XRX5 114 aa7.55□□□□□ -1.2
SPG11-216ENST00000559347 TRGV4A0A0C4DH28 118 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 PPT1P50897 306 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 C9orf85Q96MD7 179 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 Q9H8V8 135 aa7.54□□□□□ -1.2
SPG11-216ENST00000559347 UMAD1C9J7I0 102 aa7.53□□□□□ -1.2
SPG11-216ENST00000559347 RNASE3P12724 160 aaKnown RBP7.53□□□□□ -1.2
SPG11-216ENST00000559347 STOML3Q8TAV4 291 aa7.53□□□□□ -1.2
SPG11-216ENST00000559347 FAM213BQ8TBF2 198 aa7.53□□□□□ -1.2
SPG11-216ENST00000559347 TCEAL7Q9BRU2 100 aa7.53□□□□□ -1.2
SPG11-216ENST00000559347 K7EQD1 137 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 PFDN1O60925 122 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 TPT1P13693 172 aaKnown RBP7.52□□□□□ -1.21
SPG11-216ENST00000559347 UBE2G1P62253 170 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
SPG11-216ENST00000559347 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 TMUB2Q71RG4 321 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 ZC2HC1AQ96GY0 325 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 FMC1Q96HJ9 113 aa7.52□□□□□ -1.21
SPG11-216ENST00000559347 IGKV3D-20A0A0C4DH25 116 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 A0A1B0GV50 99 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 A0A1W2PPQ1 181 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 C9JCJ5 164 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 NXPH4O95158 308 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 ORM1P02763 201 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 GYPEP15421 78 aa7.51□□□□□ -1.21
SPG11-216ENST00000559347 GATA1P15976 413 aaPredicted RBP7.51□□□□□ -1.21
SPG11-216ENST00000559347 SRIP30626 198 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms