RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SPINK4O60575 86 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 TYMSP04818 313 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 ATP5G1P05496 136 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 HOXA5P20719 270 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 FAM159AQ6UWV7 190 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 ZNF415Q09FC8 603 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 TDRG1Q3Y452 100 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 ZC2HC1AQ96GY0 325 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 DNAH6Q9C0G6 4158 aa13.14□□□□□ -0.31
CASC4-209ENST00000559222 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 AKR1C3P42330 323 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 CRIP1P50238 77 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 PPT1P50897 306 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 NHLRC2Q8NBF2 726 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 NDUFAF3Q9BU61 184 aa13.13□□□□□ -0.31
CASC4-209ENST00000559222 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
CASC4-209ENST00000559222 TCTAP57738 103 aa13.12□□□□□ -0.31
CASC4-209ENST00000559222 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
CASC4-209ENST00000559222 FMC1Q96HJ9 113 aa13.12□□□□□ -0.31
CASC4-209ENST00000559222 KMT2AQ03164 3969 aa13.12□□□□□ -0.31
CASC4-209ENST00000559222 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
CASC4-209ENST00000559222 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
CASC4-209ENST00000559222 UBE2G1P62253 170 aa13.11□□□□□ -0.31
CASC4-209ENST00000559222 SAPCD1Q5SSQ6 148 aa13.11□□□□□ -0.31
CASC4-209ENST00000559222 MUC4Q99102 2169 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 LTAP01374 205 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 IGHV3-53P01767 116 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 SDF2L1Q9HCN8 221 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 MANBALQ9NQG1 85 aa13.1□□□□□ -0.31
CASC4-209ENST00000559222 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 TRGV2A0A075B6R0 118 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 TRBV6-1A0A0K0K1D8 114 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 SH2D1AO60880 128 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 OR5I1Q13606 314 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 FAM210BQ96KR6 192 aa13.09□□□□□ -0.31
CASC4-209ENST00000559222 A0A0J9YY99 117 aa13.08□□□□□ -0.32
CASC4-209ENST00000559222 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
CASC4-209ENST00000559222 TRAV26-1A0A087WT03 109 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 ZNF575Q86XF7 245 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 C11orf52Q96A22 123 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 KCNS1Q96KK3 526 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 C18orf15Q96N68 181 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
CASC4-209ENST00000559222 M0R036 132 aa13.06□□□□□ -0.32
CASC4-209ENST00000559222 SFTA3P0C7M3 94 aa13.06□□□□□ -0.32
CASC4-209ENST00000559222 BCL2P10415 239 aa13.06□□□□□ -0.32
CASC4-209ENST00000559222 RNASE3P12724 160 aaKnown RBP13.06□□□□□ -0.32
CASC4-209ENST00000559222 LGALS9BQ3B8N2 356 aa13.06□□□□□ -0.32
CASC4-209ENST00000559222 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
CASC4-209ENST00000559222 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
CASC4-209ENST00000559222 NUDT3O95989 172 aa13.05□□□□□ -0.32
CASC4-209ENST00000559222 RPL35P42766 123 aaKnown RBP13.05□□□□□ -0.32
CASC4-209ENST00000559222 VSIG2Q96IQ7 327 aa13.05□□□□□ -0.32
CASC4-209ENST00000559222 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
CASC4-209ENST00000559222 SPXQ9BT56 116 aa13.05□□□□□ -0.32
CASC4-209ENST00000559222 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
CASC4-209ENST00000559222 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
CASC4-209ENST00000559222 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
CASC4-209ENST00000559222 RASL10AQ92737 203 aa13.04□□□□□ -0.32
CASC4-209ENST00000559222 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
CASC4-209ENST00000559222 TMSB15BA0A087X1C1 80 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 RAB19A4D1S5 217 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 B4DEV8 164 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 M0R2P5 195 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 ORM1P02763 201 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 FHL2Q14192 279 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 FAM162BQ5T6X4 162 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
CASC4-209ENST00000559222 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
CASC4-209ENST00000559222 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 C9JCJ5 164 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 IFNA1P01562 189 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 IGLV2-8P01709 118 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 RPL19P84098 196 aaKnown RBP13.02□□□□□ -0.33
CASC4-209ENST00000559222 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 LYPD6BQ8NI32 183 aa13.02□□□□□ -0.33
CASC4-209ENST00000559222 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
CASC4-209ENST00000559222 P0DMU3 169 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 FAM231AP0DMU4 169 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 FAM231CP0DMU5 169 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 PRR27Q6MZM9 219 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 VAX2Q9UIW0 290 aa13.01□□□□□ -0.33
CASC4-209ENST00000559222 H3BVH4 76 aa13□□□□□ -0.33
CASC4-209ENST00000559222 LINC01559Q495D7 138 aa13□□□□□ -0.33
CASC4-209ENST00000559222 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
CASC4-209ENST00000559222 DNAH10Q8IVF4 4471 aa13□□□□□ -0.33
CASC4-209ENST00000559222 TRAV4A0A0B4J268 109 aa12.99□□□□□ -0.33
CASC4-209ENST00000559222 ASIPP42127 132 aa12.99□□□□□ -0.33
CASC4-209ENST00000559222 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms