RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 TMEM160Q9NX00 188 aa12.62□□□□□ -0.39
SPG11-215ENST00000559193 ARL3P36405 182 aa12.61□□□□□ -0.39
SPG11-215ENST00000559193 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
SPG11-215ENST00000559193 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
SPG11-215ENST00000559193 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
SPG11-215ENST00000559193 LENEPQ9Y5L5 61 aa12.61□□□□□ -0.39
SPG11-215ENST00000559193 K7ERU9 68 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 SAP30O75446 220 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 HLA-DRB4P13762 266 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 MRAP2Q96G30 205 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 HLA-DRB4X5D2U9 266 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 SPRY2O43597 315 aa12.6□□□□□ -0.39
SPG11-215ENST00000559193 A0A087WX48 190 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 SOCS3O14543 225 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 SMIM13P0DJ93 91 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 DEFB1P60022 68 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 SRSF1Q07955 248 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPG11-215ENST00000559193 SMIM2Q9BVW6 85 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 SPCS1Q9Y6A9 102 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 ZFHX3Q15911 3703 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 HIVEP3Q5T1R4 2406 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 BRD3OSQ6XYD6 125 aa12.59□□□□□ -0.39
SPG11-215ENST00000559193 C19orf84I3L1E1 186 aa12.58□□□□□ -0.4
SPG11-215ENST00000559193 K7ERJ3 54 aa12.58□□□□□ -0.4
SPG11-215ENST00000559193 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
SPG11-215ENST00000559193 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
SPG11-215ENST00000559193 IGHV1-69DA0A0B4J2H0 117 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 M0R381 172 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 IGHV1-69P01742 117 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 PHLDA1Q8WV24 401 aaPredicted RBP12.57□□□□□ -0.4
SPG11-215ENST00000559193 NDUFA4O00483 81 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 SAMD5Q5TGI4 173 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 RASL10AQ92737 203 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 ABCA2Q9BZC7 2435 aa12.57□□□□□ -0.4
SPG11-215ENST00000559193 CEND1Q8N111 149 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 MEGF9Q9H1U4 602 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 AKAP6Q13023 2319 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 TRAV21A0A0B4J279 112 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.56□□□□□ -0.4
SPG11-215ENST00000559193 OVOL1O14753 267 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 FABP2P12104 132 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 LY6DQ14210 128 aa12.56□□□□□ -0.4
SPG11-215ENST00000559193 PLNP26678 52 aa12.55□□□□□ -0.4
SPG11-215ENST00000559193 RPL39LQ96EH5 51 aaKnown RBP12.55□□□□□ -0.4
SPG11-215ENST00000559193 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
SPG11-215ENST00000559193 ANXA2RQ3ZCQ2 193 aa12.55□□□□□ -0.4
SPG11-215ENST00000559193 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
SPG11-215ENST00000559193 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 K7EMI3 77 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 IGHV3-11P01762 117 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 ASIPP42127 132 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 NEGR1Q7Z3B1 354 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
SPG11-215ENST00000559193 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
SPG11-215ENST00000559193 F6UB75 175 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
SPG11-215ENST00000559193 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 DPH3P1Q9H4G8 78 aa12.54□□□□□ -0.4
SPG11-215ENST00000559193 F8VRH5 84 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 LY6EQ16553 131 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 TOMM6Q96B49 74 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 H7C1H1 209 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 C20orf78Q9BR46 151 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 PHLDA3Q9Y5J5 127 aa12.53□□□□□ -0.4
SPG11-215ENST00000559193 RNASE4P34096 147 aaKnown RBP12.52□□□□□ -0.4
SPG11-215ENST00000559193 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.4
SPG11-215ENST00000559193 IGHV4-61A0A0C4DH41 118 aa12.52□□□□□ -0.41
SPG11-215ENST00000559193 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
SPG11-215ENST00000559193 SLC25A16P16260 332 aa12.52□□□□□ -0.41
SPG11-215ENST00000559193 MGPP08493 103 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 APRG1Q8IVJ8 170 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 G3V4G9 280 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 GNRH2O43555 120 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 IGHG2P01859 326 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 RNASE3P12724 160 aaKnown RBP12.51□□□□□ -0.41
SPG11-215ENST00000559193 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
SPG11-215ENST00000559193 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
SPG11-215ENST00000559193 CHTOPQ9Y3Y2 248 aaKnown RBP12.51□□□□□ -0.41
SPG11-215ENST00000559193 BRI3O95415 125 aa12.5□□□□□ -0.41
SPG11-215ENST00000559193 LCNL1Q6ZST4 164 aa12.5□□□□□ -0.41
SPG11-215ENST00000559193 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
SPG11-215ENST00000559193 H3BUA1 57 aa12.5□□□□□ -0.41
SPG11-215ENST00000559193 TAL2Q16559 108 aa12.5□□□□□ -0.41
SPG11-215ENST00000559193 PF4V1P10720 104 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 Q6ZS46 218 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 A6NDX4 124 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 H3BUX3 64 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
SPG11-215ENST00000559193 BLCAPP62952 87 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms