RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 C9JAW5 83 aa8.61□□□□□ -1.03
PCAT29-201ENST00000558411 PRTN3P24158 256 aa8.61□□□□□ -1.03
PCAT29-201ENST00000558411 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
PCAT29-201ENST00000558411 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
PCAT29-201ENST00000558411 NBEAQ8NFP9 2946 aa8.61□□□□□ -1.03
PCAT29-201ENST00000558411 ZNF318Q5VUA4 2279 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 IGLV11-55A0A075B6I3 123 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 F8W735 103 aaPredicted RBP8.6□□□□□ -1.03
PCAT29-201ENST00000558411 CRLF1O75462 422 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 SEM1Q6ZVN7 128 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 C1orf210Q8IVY1 113 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 TIMD4Q96H15 378 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 CACNA1HO95180 2353 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 Q8N1Y9 231 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 TMEM126AQ9H061 195 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
PCAT29-201ENST00000558411 MALRD1Q5VYJ5 2156 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 FREM2Q5SZK8 3169 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 TRAV8-4A0A0B4J246 113 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 M0R381 172 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 FAM159AQ6UWV7 190 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 ODF3Q96PU9 254 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 KLK15Q9H2R5 256 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 C21orf62Q9NYP8 219 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 ZNF883P0CG24 379 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 ARL3P36405 182 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 ATP1A1-AS1Q5TC04 95 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 IGFL4Q6B9Z1 124 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 KLHL30-AS1Q8NEE0 82 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 FANCD2OSQ96PS1 177 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 HIF1ANQ9NWT6 349 aa8.59□□□□□ -1.03
PCAT29-201ENST00000558411 CADP27708 2225 aa8.59□□□□□ -1.04
PCAT29-201ENST00000558411 A0A0B4J2C4 111 aa8.58□□□□□ -1.04
PCAT29-201ENST00000558411 ATXN8Q156A1 80 aa8.58□□□□□ -1.04
PCAT29-201ENST00000558411 ANXA2RQ3ZCQ2 193 aa8.58□□□□□ -1.04
PCAT29-201ENST00000558411 AHCTF1Q8WYP5 2266 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 IGLV4-69A0A075B6H9 119 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 TRAV17A0A0B4J275 112 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 NBR2O15453 112 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 PPP1R17O96001 155 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 IGHV3-33P01772 117 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 CLEC3BP05452 202 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 LPAL2Q16609 132 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 IGFL2Q6UWQ7 119 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 NTN5Q8WTR8 489 aaPredicted RBP8.57□□□□□ -1.04
PCAT29-201ENST00000558411 MRPL53Q96EL3 112 aaKnown RBP8.57□□□□□ -1.04
PCAT29-201ENST00000558411 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 BRI3O95415 125 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 TGFAP01135 160 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 CRYGDP07320 174 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 ADIPOQQ15848 244 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 NPBQ8NG41 125 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 CCL17Q92583 94 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 S4R3C0 116 aa8.57□□□□□ -1.04
PCAT29-201ENST00000558411 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
PCAT29-201ENST00000558411 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 MEIG1Q5JSS6 88 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 Q6ZS46 218 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 TMEM263Q8WUH6 116 aaKnown RBP8.56□□□□□ -1.04
PCAT29-201ENST00000558411 AGPAT4-IT1Q9H0P7 198 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 ABCA1O95477 2261 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 RNF223E7ERA6 249 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 TRPT1Q86TN4 253 aaKnown RBP8.56□□□□□ -1.04
PCAT29-201ENST00000558411 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
PCAT29-201ENST00000558411 H3BMM0 161 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 LGALS9O00182 355 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 CTSGP08311 255 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 PMVKQ15126 192 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 Q6ZQT7 251 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 C1orf122Q6ZSJ8 110 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 FAM57AQ8TBR7 257 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 AMELXQ99217 191 aa8.55□□□□□ -1.04
PCAT29-201ENST00000558411 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
PCAT29-201ENST00000558411 TRAV2A0A0B4J234 112 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 MSRB2Q9Y3D2 182 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 A4D1N5 150 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 TIMM23O14925 209 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 LY6DQ14210 128 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 MUC6Q6W4X9 2439 aa8.54□□□□□ -1.04
PCAT29-201ENST00000558411 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 MED14OSP0DP75 135 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 FDCSPQ8NFU4 85 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 RPL39LQ96EH5 51 aaKnown RBP8.53□□□□□ -1.04
PCAT29-201ENST00000558411 VPREB3Q9UKI3 123 aa8.53□□□□□ -1.04
PCAT29-201ENST00000558411 LENEPQ9Y5L5 61 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms