RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PRR9Q5T870 116 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 TMEM75Q8N9X5 138 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 C11orf72Q8NBR9 251 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 SFT2D1Q8WV19 159 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 TRGV1A0A0A0MS02 117 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 TRAV8-1A0A0A6YYK1 113 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 FAM74A7A6NL05 159 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 GGTLC3B5MD39 225 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 H3BNG1 76 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 SPINK4O60575 86 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 H2AFB1P0C5Y9 115 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 FGF8P55075 233 aaPredicted RBP5.97□□□□□ -1.45
TPM1-213ENST00000558400 OR5I1Q13606 314 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 SMUG1Q53HV7 270 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 SSX7Q7RTT5 188 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 FAM213BQ8TBF2 198 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 TMPRSS5Q9H3S3 457 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 ZFP30Q9Y2G7 519 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 MUC4Q99102 2169 aa5.97□□□□□ -1.45
TPM1-213ENST00000558400 FABP5P3A8MUU1 101 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 IGLV2-11P01706 119 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 S100A9P06702 114 aaKnown RBP5.96□□□□□ -1.46
TPM1-213ENST00000558400 PFN1P07737 140 aaKnown RBP5.96□□□□□ -1.46
TPM1-213ENST00000558400 CCL18P55774 89 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 UBE2G2P60604 165 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 TMEM183BQ1AE95 376 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 MUC21Q5SSG8 566 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 CST9LP1Q5W188 147 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 Q6ZTI0 123 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 PRNTQ86SH4 94 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 SLC51BQ86UW2 128 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 UBE2DNLQ8IWF7 75 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 TMEM183AQ8IXX5 376 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 RASL10AQ92737 203 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 TVP23CQ96ET8 276 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 SGK494Q96LW2 274 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 SDF2L1Q9HCN8 221 aa5.96□□□□□ -1.46
TPM1-213ENST00000558400 TRAV1-1A0A0B4J248 108 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 PEX7O00628 323 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 CIDEAO60543 219 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 NUDT3O95989 172 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 GCGP01275 180 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 Q6ZQT7 251 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 FMC1Q96HJ9 113 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 TXNDC17Q9BRA2 123 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 MDFICQ9P1T7 246 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 NAGKQ9UJ70 344 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
TPM1-213ENST00000558400 TRAV26-1A0A087WT03 109 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 TRBV6-1A0A0K0K1D8 114 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 M0R2P5 195 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 GNRH2O43555 120 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 PAGE4O60829 102 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 UBE2G1P62253 170 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 TNP2Q05952 138 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 COX8CQ7Z4L0 72 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 LINC00479Q96M42 142 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 PRO0255Q9UI72 69 aa5.94□□□□□ -1.46
TPM1-213ENST00000558400 TRAV34A0A0B4J273 112 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 IGHV3-16A0A0C4DH30 117 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 HOXA5P20719 270 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 SULT1A2P50226 295 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 XP32Q5T750 250 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 PTH2Q96A98 100 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 C8orf49Q96NF6 230 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 MANBALQ9NQG1 85 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 MRPL16Q9NX20 251 aaKnown RBP5.93□□□□□ -1.46
TPM1-213ENST00000558400 HHLA3Q9XRX5 114 aa5.93□□□□□ -1.46
TPM1-213ENST00000558400 TRGV4A0A0C4DH28 118 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 A6NJY4 79 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 PAX4O43316 350 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 TYMSP04818 313 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 TAGLN2P37802 199 aaKnown RBP5.92□□□□□ -1.46
TPM1-213ENST00000558400 AKR1C3P42330 323 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 ZNF80P51504 273 aaPredicted RBP5.92□□□□□ -1.46
TPM1-213ENST00000558400 PIK3CD-AS1Q5SR53 167 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 FAM162BQ5T6X4 162 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 C9orf62Q8N4C0 152 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 OR4C5Q8NGB2 326 aa5.92□□□□□ -1.46
TPM1-213ENST00000558400 TRAV4A0A0B4J268 109 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 A0A0J9YY99 117 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 LTAP01374 205 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 IFNA1P01562 189 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 ORM1P02763 201 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 S100A4P26447 101 aaKnown RBP5.91□□□□□ -1.46
TPM1-213ENST00000558400 FHL2Q14192 279 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 MRPL23Q16540 153 aaKnown RBP5.91□□□□□ -1.46
TPM1-213ENST00000558400 ZNF876PQ49A33 203 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 Q86TA4 180 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
TPM1-213ENST00000558400 IGKV3D-20A0A0C4DH25 116 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 A0A1B0GV50 99 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 B4DEV8 164 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 IGHV3-53P01767 116 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 ASIPP42127 132 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 CRYBA4P53673 196 aa5.9□□□□□ -1.46
TPM1-213ENST00000558400 BLOC1S1P78537 153 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms