RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 WNK2Q9Y3S1 2297 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 MUC21A0A0G2JKD1 596 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 IGHV7-4-1A0A0J9YVY3 117 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 MUC21A0A140T8X8 626 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 K7EMT4 169 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 SOCS3O14543 225 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 NCR2O95944 276 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 FCER1GP30273 86 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 Q5PR19 223 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 MUC21Q5SSG8 566 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 SPANXN1Q5VSR9 72 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 PRSS57Q6UWY2 283 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 Q8N8P6 123 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 OR4X2Q8NGF9 303 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 DAZ1Q9NQZ3 744 aaKnown RBP5.54□□□□□ -1.52
VPS13C-206ENST00000558338 LINC00527Q9UJ94 153 aa5.54□□□□□ -1.52
VPS13C-206ENST00000558338 LRBAP50851 2863 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 SMKR1H3BMG3 65 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 ATP5LO75964 103 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 ID1P41134 155 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 CFHR3Q02985 330 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 LOXL1Q08397 574 aaPredicted RBP5.53□□□□□ -1.52
VPS13C-206ENST00000558338 FAM106AQ4KMX7 169 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 UNQ9165/PRO28630Q6UXU0 137 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 LINC01356Q8N9X3 169 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 OR2K2Q8NGT1 345 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 JMJD8Q96S16 334 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 ATRXP46100 2492 aa5.53□□□□□ -1.52
VPS13C-206ENST00000558338 TRBV12-3P01733 135 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 EDN2P20800 178 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 ASIPP42127 132 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 TFPI2P48307 235 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 PCP4P48539 62 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 FOXE3Q13461 319 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 ZNF124Q15973 351 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 APRG1Q8IVJ8 170 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 OR9G4Q8NGQ1 327 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 MSRB1Q9NZV6 116 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 C11orf21Q9P2W6 132 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 PEF1Q9UBV8 284 aaKnown RBP5.52□□□□□ -1.53
VPS13C-206ENST00000558338 SMPXQ9UHP9 88 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 UFC1Q9Y3C8 167 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 COX11Q9Y6N1 276 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 DCHS2Q6V1P9 2916 aa5.52□□□□□ -1.53
VPS13C-206ENST00000558338 K7EMI3 77 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 SIVA1O15304 175 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 PPP1R17O96001 155 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 IGHV3-11P01762 117 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 LEPP41159 167 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 BVES-AS1Q5T3Y7 98 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 GPHB5Q86YW7 130 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 ZFAND2AQ8N6M9 145 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 FAM19A4Q96LR4 140 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 RHPN1-AS1Q9BWJ2 59 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 SPTBN1Q01082 2364 aaKnown RBP5.51□□□□□ -1.53
VPS13C-206ENST00000558338 NBASA2RRP1 2371 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 H3BVH4 76 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 NUDT3O95989 172 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 S100A4P26447 101 aaKnown RBP5.51□□□□□ -1.53
VPS13C-206ENST00000558338 BLCAPP62952 87 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 SEC11AP67812 179 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 DPH3P1Q9H4G8 78 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 ABCA2Q9BZC7 2435 aa5.51□□□□□ -1.53
VPS13C-206ENST00000558338 IGLV2-18A0A075B6J9 118 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 M0R381 172 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 COX6B1P14854 86 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 EVI2AP22794 236 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 PSMB8P28062 276 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 LAGE3Q14657 143 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 KIR3DS1Q14943 382 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 MPV17L2Q567V2 206 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 NRACQ8N912 160 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 AP1S3Q96PC3 154 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 ODF3Q96PU9 254 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 CITED1Q99966 193 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 C20orf78Q9BR46 151 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 MCRIP2Q9BUT9 160 aaKnown RBP5.5□□□□□ -1.53
VPS13C-206ENST00000558338 KLK15Q9H2R5 256 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 PHLDA3Q9Y5J5 127 aa5.5□□□□□ -1.53
VPS13C-206ENST00000558338 CD5LO43866 347 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 NPSP0C0P6 89 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 HLA-DRB4P13762 266 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 SRSF1Q07955 248 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS13C-206ENST00000558338 ORMDL2Q53FV1 153 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 PRR9Q5T870 116 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 BOD1L2Q8IYS8 172 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 MYOZ3Q8TDC0 251 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 TMEM158Q8WZ71 300 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 CBY1Q9Y3M2 126 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 HLA-DRB4X5D2U9 266 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 A1L4Q6 167 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 LINC01549A6NIU2 74 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 SAP30O75446 220 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 DPM2O94777 84 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 NXPH4O95158 308 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 IGKCP01834 107 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 PRSS1P07477 247 aa5.49□□□□□ -1.53
VPS13C-206ENST00000558338 FGF6P10767 208 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms