RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 PCNPQ8WW12 178 aaKnown RBP8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 RASL10AQ92737 203 aa8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 ZNF479Q96JC4 524 aa8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 PSG8Q9UQ74 426 aa8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 HECTD4Q9Y4D8 3996 aa8.53□□□□□ -1.04
CDC42BPB-202ENST00000558321 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 A0A1W2PPQ1 181 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 TAAR5O14804 337 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 SIVA1O15304 175 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 IFNA7P01567 189 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 ZFP69Q49AA0 526 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 AKR1C8PQ5T2L2 129 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 PRNTQ86SH4 94 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
CDC42BPB-202ENST00000558321 TRAV4A0A0B4J268 109 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 GGTLC3B5MD39 225 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 NXPH4O95158 308 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 GCGP01275 180 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 TYMSP04818 313 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 GYPEP15421 78 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 FLI1Q01543 452 aaPredicted RBP8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 SMUG1Q53HV7 270 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 CYB561D1Q8N8Q1 229 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 KRTAP1-5Q9BYS1 174 aa8.51□□□□□ -1.05
CDC42BPB-202ENST00000558321 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 C9JCJ5 164 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 ARPC5O15511 151 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 ORM1P02763 201 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 SRIP30626 198 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 PPT1P50897 306 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 ZNF80P51504 273 aaPredicted RBP8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 UBE2G2P60604 165 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 SAPCD1Q5SSQ6 148 aa8.5□□□□□ -1.05
CDC42BPB-202ENST00000558321 TRAV34A0A0B4J273 112 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 A0A1W2PRE2 83 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 K7EQD1 137 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 PFN1P07737 140 aaKnown RBP8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 FGF8P55075 233 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 ZNF726P1Q15940 193 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 ZNF876PQ49A33 203 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 LINC00479Q96M42 142 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 TXNDC17Q9BRA2 123 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 MUC4Q99102 2169 aa8.49□□□□□ -1.05
CDC42BPB-202ENST00000558321 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
CDC42BPB-202ENST00000558321 TRAV9-2A0A087WT02 112 aa8.48□□□□□ -1.05
CDC42BPB-202ENST00000558321 IGLV2-11P01706 119 aa8.48□□□□□ -1.05
CDC42BPB-202ENST00000558321 BTF3P20290 206 aaKnown RBP8.48□□□□□ -1.05
CDC42BPB-202ENST00000558321 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
CDC42BPB-202ENST00000558321 DNAH17Q9UFH2 4485 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 G3V3Q6 166 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 SMLR1H3BR10 107 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 PEX7O00628 323 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 LINC00315P59091 139 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 SPATA12Q7Z6I5 190 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 NHLRC2Q8NBF2 726 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 STOML3Q8TAV4 291 aa8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 NKX6-2Q9C056 277 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPB-202ENST00000558321 IGHV3-73A0A0B4J1V6 119 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 FAM74A7A6NL05 159 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 S100A4P26447 101 aaKnown RBP8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 SH2D6Q7Z4S9 175 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 MAP1LC3BQ9GZQ8 125 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 LY96Q9Y6Y9 160 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
CDC42BPB-202ENST00000558321 FAT2Q9NYQ8 4349 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 RS1O15537 224 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 CIDEAO60543 219 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 GATA1P15976 413 aaPredicted RBP8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 EVI2AP22794 236 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 CST9LP1Q5W188 147 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 HIST1H2BAQ96A08 127 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
CDC42BPB-202ENST00000558321 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 EREGO14944 169 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 CFAP126Q5VTH2 177 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 NFE4Q86UQ8 179 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 KCNRGQ8N5I3 272 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 C9orf85Q96MD7 179 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 KRTAP17-1Q9BYP8 105 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
CDC42BPB-202ENST00000558321 B4DEV8 164 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 RNASE3P12724 160 aaKnown RBP8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 ASIPP42127 132 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 UBE2G1P62253 170 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 LGALSLQ3ZCW2 172 aaPredicted RBP8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 ZNF506Q5JVG8 444 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 DPPA3Q6W0C5 159 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 Q86TA4 180 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
CDC42BPB-202ENST00000558321 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms