RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PFN1P07737 140 aaKnown RBP6.36□□□□□ -1.39
SPG11-207ENST00000558138 P0DMU3 169 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
SPG11-207ENST00000558138 SULT1A2P50226 295 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 LGALS9CQ6DKI2 356 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 C15orf53Q8NAA6 179 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 C11orf72Q8NBR9 251 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 SCO2A0A1W2PP80 73 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 GNRH2O43555 120 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 IGLV2-11P01706 119 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 ORM1P02763 201 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 TYMSP04818 313 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 ALKAL2Q6UX46 152 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 SPXQ9BT56 116 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 MDFICQ9P1T7 246 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 ZFP30Q9Y2G7 519 aa6.35□□□□□ -1.39
SPG11-207ENST00000558138 TRAV26-1A0A087WT03 109 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 TRGV4A0A0C4DH28 118 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 FABP5P3A8MUU1 101 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 C9JCJ5 164 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 M0R036 132 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 SPINK4O60575 86 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 S100A9P06702 114 aaKnown RBP6.34□□□□□ -1.39
SPG11-207ENST00000558138 ZNF80P51504 273 aaPredicted RBP6.34□□□□□ -1.39
SPG11-207ENST00000558138 LGALS9BQ3B8N2 356 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 NHLRC2Q8NBF2 726 aa6.34□□□□□ -1.39
SPG11-207ENST00000558138 IGHV3-16A0A0C4DH30 117 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 B4DEV8 164 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 M0R2P5 195 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 ASIPP42127 132 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 BLOC1S1P78537 153 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 CCL20P78556 96 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 FAM162BQ5T6X4 162 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 PCNPQ8WW12 178 aaKnown RBP6.33□□□□□ -1.4
SPG11-207ENST00000558138 ZC2HC1AQ96GY0 325 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 LYSTQ99698 3801 aa6.33□□□□□ -1.4
SPG11-207ENST00000558138 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 TRAV1-1A0A0B4J248 108 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 SH2D1AO60880 128 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 SFTA3P0C7M3 94 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
SPG11-207ENST00000558138 CCL18P55774 89 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 TDRG1Q3Y452 100 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 BAGE2Q86Y30 109 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 LINC00612Q8N6U2 182 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 OR4C5Q8NGB2 326 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 TXNDC17Q9BRA2 123 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 BOLA1Q9Y3E2 137 aa6.32□□□□□ -1.4
SPG11-207ENST00000558138 TRBV6-1A0A0K0K1D8 114 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 GRIFINA4D1Z8 144 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 PAX4O43316 350 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 PDE6DO43924 150 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 LTAP01374 205 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 BCL2P10415 239 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 HOXA5P20719 270 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 TAGLN2P37802 199 aaKnown RBP6.31□□□□□ -1.4
SPG11-207ENST00000558138 RPL35P42766 123 aaKnown RBP6.31□□□□□ -1.4
SPG11-207ENST00000558138 CEBPGP53567 150 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 MEF2BQ02080 365 aaPredicted RBP6.31□□□□□ -1.4
SPG11-207ENST00000558138 SLAQ13239 276 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 POM121L12Q8N7R1 296 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
SPG11-207ENST00000558138 VAX2Q9UIW0 290 aa6.31□□□□□ -1.4
SPG11-207ENST00000558138 KMT2CQ8NEZ4 4911 aaKnown RBP6.31□□□□□ -1.4
SPG11-207ENST00000558138 IGLV2-18A0A075B6J9 118 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 TRAV4A0A0B4J268 109 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 H3BVH4 76 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 GNG4P50150 75 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 ZNF876PQ49A33 203 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 CENPWQ5EE01 88 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 RASL10AQ92737 203 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 C11orf21Q9P2W6 132 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
SPG11-207ENST00000558138 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 IGKV3D-20A0A0C4DH25 116 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 M0R2N4 97 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 ZNF479Q96JC4 524 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 C18orf15Q96N68 181 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 EIF5A2Q9GZV4 153 aaKnown RBP6.29□□□□□ -1.4
SPG11-207ENST00000558138 PRO0255Q9UI72 69 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 PHLDA3Q9Y5J5 127 aa6.29□□□□□ -1.4
SPG11-207ENST00000558138 ALMS1Q8TCU4 4167 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 A0A096LPF7 62 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 RBFOX3A6NFN3 312 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 KRBOX1C9JBD0 128 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 M0R381 172 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 SRIP30626 198 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 RNF212Q495C1 297 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 ZNF506Q5JVG8 444 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 C11orf52Q96A22 123 aa6.28□□□□□ -1.4
SPG11-207ENST00000558138 C9orf85Q96MD7 179 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms