RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SSBP4Q9BWG4 385 aaPredicted RBP15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 GNB1LQ9BYB4 327 aa15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 RBMY1BA6NDE4 496 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 RBMY1EA6NEQ0 496 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 RBMY1DP0C7P1 496 aaKnown RBP15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 GFI1BQ5VTD9 330 aa15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 RPS20P60866 119 aaKnown RBP15.09■□□□□ 0.01
SNRPA1-205ENST00000558036 HBBP68871 147 aa15.09■□□□□ 0.01
SNRPA1-205ENST00000558036 Q6AWC8 147 aa15.09■□□□□ 0.01
SNRPA1-205ENST00000558036 FER1L6-AS1Q8NA97 138 aa15.09■□□□□ 0.01
SNRPA1-205ENST00000558036 A0A1B0GUT8 65 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 IGLC6P0CF74 106 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 LEPP41159 167 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 CDKN1BP46527 198 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 ATP5L2Q7Z4Y8 100 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 ODF3Q96PU9 254 aa15.08■□□□□ 0.01
SNRPA1-205ENST00000558036 STAB1Q9NY15 2570 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 NOTCH3Q9UM47 2321 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 CD7P09564 240 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 KIAA1644Q3SXP7 199 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 ANXA2RQ3ZCQ2 193 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 WDR73Q6P4I2 378 aa15.08■□□□□ 0
SNRPA1-205ENST00000558036 OR11H12B2RN74 326 aa15.07■□□□□ 0
SNRPA1-205ENST00000558036 SLAQ13239 276 aa15.07■□□□□ 0
SNRPA1-205ENST00000558036 WFDC10AQ9H1F0 79 aa15.07■□□□□ 0
SNRPA1-205ENST00000558036 SNRPEP62304 92 aaKnown RBP15.07■□□□□ 0
SNRPA1-205ENST00000558036 LOC105371267A0A1B0GV96 52 aa15.06■□□□□ 0
SNRPA1-205ENST00000558036 C7orf71A4D174 169 aa15.06■□□□□ 0
SNRPA1-205ENST00000558036 S100A6P06703 90 aa15.06■□□□□ 0
SNRPA1-205ENST00000558036 ZNF324O75467 553 aaPredicted RBP15.05■□□□□ 0
SNRPA1-205ENST00000558036 NDUFA6P56556 154 aa15.05■□□□□ 0
SNRPA1-205ENST00000558036 RASL11AQ6T310 242 aa15.05■□□□□ 0
SNRPA1-205ENST00000558036 TIMM8BQ9Y5J9 83 aaPredicted RBP15.05■□□□□ 0
SNRPA1-205ENST00000558036 GNRH2O43555 120 aa15.05■□□□□ -0
SNRPA1-205ENST00000558036 SPRY2O43597 315 aa15.05■□□□□ -0
SNRPA1-205ENST00000558036 TSPOP30536 169 aa15.05■□□□□ -0
SNRPA1-205ENST00000558036 CTRLP40313 264 aa15.05■□□□□ -0
SNRPA1-205ENST00000558036 HLA-DQA1P01909 254 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 MT-ND6P03923 174 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 H3BVH4 76 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 APCSP02743 223 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 BEAN1Q3B7T3 259 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 OR2K2Q8NGT1 345 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 BORCS7Q96B45 105 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 MSRB1Q9NZV6 116 aa15.04■□□□□ -0
SNRPA1-205ENST00000558036 A8MTW9 85 aa15.03■□□□□ -0
SNRPA1-205ENST00000558036 RBMY1A1P0DJD3 496 aaKnown RBP15.03■□□□□ -0
SNRPA1-205ENST00000558036 RBMY1CP0DJD4 496 aa15.03■□□□□ -0
SNRPA1-205ENST00000558036 NTF3P20783 257 aa15.03■□□□□ -0
SNRPA1-205ENST00000558036 RIGQ13278 110 aa15.03■□□□□ -0
SNRPA1-205ENST00000558036 RBMY1FQ15415 496 aaKnown RBP15.03■□□□□ -0
SNRPA1-205ENST00000558036 COX19Q49B96 90 aa15.03■□□□□ -0
SNRPA1-205ENST00000558036 CRXO43186 299 aaPredicted RBP15.02■□□□□ -0
SNRPA1-205ENST00000558036 OR10AG1Q8NH19 301 aa15.02■□□□□ -0
SNRPA1-205ENST00000558036 COL6A5A8TX70 2615 aa15.02■□□□□ -0
SNRPA1-205ENST00000558036 TWIST1Q15672 202 aa15.02□□□□□ -0.01
SNRPA1-205ENST00000558036 FAM159AQ6UWV7 190 aa15.02□□□□□ -0.01
SNRPA1-205ENST00000558036 STHQ8IWL8 128 aa15.02□□□□□ -0.01
SNRPA1-205ENST00000558036 C3orf56Q8N813 242 aa15.02□□□□□ -0.01
SNRPA1-205ENST00000558036 TP53TG3Q9ULZ0 132 aa15.02□□□□□ -0.01
SNRPA1-205ENST00000558036 C19orf73Q9NVV2 129 aa15.01□□□□□ -0.01
SNRPA1-205ENST00000558036 C5orf52A6NGY3 159 aa15.01□□□□□ -0.01
SNRPA1-205ENST00000558036 ZNF747Q9BV97 191 aa15.01□□□□□ -0.01
SNRPA1-205ENST00000558036 S100A4P26447 101 aaKnown RBP15□□□□□ -0.01
SNRPA1-205ENST00000558036 C9orf66Q5T8R8 295 aa15□□□□□ -0.01
SNRPA1-205ENST00000558036 ASIPP42127 132 aa14.99□□□□□ -0.01
SNRPA1-205ENST00000558036 F2Z2F3 143 aa14.99□□□□□ -0.01
SNRPA1-205ENST00000558036 IGLL1P15814 213 aa14.99□□□□□ -0.01
SNRPA1-205ENST00000558036 TRPT1Q86TN4 253 aaKnown RBP14.99□□□□□ -0.01
SNRPA1-205ENST00000558036 PKD1L1Q8TDX9 2849 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 HTN1P15515 57 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 CNFNQ9BYD5 112 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 PRM2P04554 102 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 OR5AL1P0C617 328 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 RNASE3P12724 160 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 SRIP30626 198 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 INSL3P51460 131 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 PDZD11Q5EBL8 140 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 XCL2Q9UBD3 114 aa14.98□□□□□ -0.01
SNRPA1-205ENST00000558036 A0A1B0GW15 77 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 SNAI2O43623 268 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 C12orf54Q6X4T0 127 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 Q8N1Y9 231 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 IGHV1OR15-1A0A075B7D0 117 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 SPANXN1Q5VSR9 72 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 AMN1Q8IY45 258 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 KCNS1Q96KK3 526 aa14.96□□□□□ -0.01
SNRPA1-205ENST00000558036 M0R381 172 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 S100A8P05109 93 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 TDRG1Q3Y452 100 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 DEFB125Q8N687 156 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 WFDC9Q8NEX5 89 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 MDFICQ9P1T7 246 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 LOC102724200A0A096LPH7 203 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 RPL35AP18077 110 aaKnown RBP14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 CMC4P56277 68 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 ZNF493Q6ZR52 646 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 FAM110AQ9BQ89 295 aa14.95□□□□□ -0.02
SNRPA1-205ENST00000558036 GATD1Q8NB37 220 aa14.94□□□□□ -0.02
SNRPA1-205ENST00000558036 PHLDA3Q9Y5J5 127 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms