RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 LRP1BQ9NZR2 4599 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 IGHV3-16A0A0C4DH30 117 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
SHMT2-235ENST00000557740 GNRH2O43555 120 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 EVI2AP22794 236 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 CDC34P49427 236 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-235ENST00000557740 KCNS1Q96KK3 526 aa9.97□□□□□ -0.81
SHMT2-235ENST00000557740 SERTM2A0A1B0GWG4 89 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 K7EP13 123 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 TYMSP04818 313 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 WFDC10BQ8IUB3 73 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 TNFRSF18Q9Y5U5 241 aa9.96□□□□□ -0.82
SHMT2-235ENST00000557740 K7EQM0 130 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 CDPF1Q6NVV7 123 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 SH2D6Q7Z4S9 175 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 TVP23CQ96ET8 276 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 ALG5Q9Y673 324 aa9.95□□□□□ -0.82
SHMT2-235ENST00000557740 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
SHMT2-235ENST00000557740 OR2G3Q8NGZ4 309 aa9.94□□□□□ -0.82
SHMT2-235ENST00000557740 SGK494Q96LW2 274 aa9.94□□□□□ -0.82
SHMT2-235ENST00000557740 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
SHMT2-235ENST00000557740 TCRAP04437 139 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 CRYGDP07320 174 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 STAG3L2P0CL84 134 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 STAG3L3P0CL85 134 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 DNAH10OSP0CZ25 163 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 GATA1P15976 413 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-235ENST00000557740 GCHFRP30047 84 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 PPT1P50897 306 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 ZFP69Q49AA0 526 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 RAB24Q969Q5 203 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 PSMG3Q9BT73 122 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-235ENST00000557740 BATF3Q9NR55 127 aa9.93□□□□□ -0.82
SHMT2-235ENST00000557740 A0A087WTM6 91 aa9.92□□□□□ -0.82
SHMT2-235ENST00000557740 MBP02144 154 aa9.92□□□□□ -0.82
SHMT2-235ENST00000557740 FUSP35637 526 aaKnown RBP eCLIP9.92□□□□□ -0.82
SHMT2-235ENST00000557740 AQP10Q96PS8 301 aa9.92□□□□□ -0.82
SHMT2-235ENST00000557740 MED28Q9H204 178 aa9.92□□□□□ -0.82
SHMT2-235ENST00000557740 TAAR5O14804 337 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 GCGP01275 180 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 ATP6V0CP27449 155 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 TIRAPP58753 221 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 TMEM167BQ9NRX6 74 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 DNAH5Q8TE73 4624 aa9.91□□□□□ -0.82
SHMT2-235ENST00000557740 PTTG1O95997 202 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 CXorf1O96002 111 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
SHMT2-235ENST00000557740 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-235ENST00000557740 SERF2P84101 59 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 FLI1Q01543 452 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-235ENST00000557740 SMUG1Q53HV7 270 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 CYB561D1Q8N8Q1 229 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 SH3BGRL3Q9H299 93 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
SHMT2-235ENST00000557740 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 IGHV3-38A0A0C4DH36 116 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 CIDEAO60543 219 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 SUMO1P63165 101 aaKnown RBP9.89□□□□□ -0.83
SHMT2-235ENST00000557740 RHOHQ15669 191 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 CFAP126Q5VTH2 177 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 PRNTQ86SH4 94 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 TMEM75Q8N9X5 138 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 SUN5Q8TC36 379 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 ACTR3CQ9C0K3 210 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-235ENST00000557740 C11orf21Q9P2W6 132 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 EPDR1Q9UM22 224 aa9.89□□□□□ -0.83
SHMT2-235ENST00000557740 IGHV3-73A0A0B4J1V6 119 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 RS1O15537 224 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 PSCAO43653 123 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 INO80EQ8NBZ0 244 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-235ENST00000557740 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 TNFSF18Q9UNG2 199 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 BOLA1Q9Y3E2 137 aa9.88□□□□□ -0.83
SHMT2-235ENST00000557740 APOBP04114 4563 aaKnown RBP9.88□□□□□ -0.83
SHMT2-235ENST00000557740 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 TRBV6-4A0A1B0GX49 114 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 EPM2AB3EWF7 344 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 IGLV2-11P01706 119 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 GIPP09681 153 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-235ENST00000557740 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 ZNF506Q5JVG8 444 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 SAPCD1Q5SSQ6 148 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 DPPA3Q6W0C5 159 aa9.87□□□□□ -0.83
SHMT2-235ENST00000557740 FXYD6-FXYD2A0A087WZ82 144 aa9.86□□□□□ -0.83
SHMT2-235ENST00000557740 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
SHMT2-235ENST00000557740 PTH2Q96A98 100 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms