RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
SLIRP-211ENST00000557623 TVP23CQ96ET8 276 aa8.82□□□□□ -1
SLIRP-211ENST00000557623 SGK494Q96LW2 274 aa8.82□□□□□ -1
SLIRP-211ENST00000557623 TP53TG3Q9ULZ0 132 aa8.82□□□□□ -1
SLIRP-211ENST00000557623 IGLV2-11P01706 119 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 P0DMU3 169 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 FAM231AP0DMU4 169 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 FAM231CP0DMU5 169 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 TDRG1Q3Y452 100 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 SMUG1Q53HV7 270 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 CST9LP1Q5W188 147 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 KCNS1Q96KK3 526 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 NAGKQ9UJ70 344 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 KLF12Q9Y4X4 402 aa8.81□□□□□ -1
SLIRP-211ENST00000557623 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
SLIRP-211ENST00000557623 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 TEX46H3BTG2 121 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 SPINK4O60575 86 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 Q6ZTI0 123 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 C18orf15Q96N68 181 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 C8orf49Q96NF6 230 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 SPXQ9BT56 116 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 SDF2L1Q9HCN8 221 aa8.8□□□□□ -1
SLIRP-211ENST00000557623 TRAV34A0A0B4J273 112 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 PAGE4O60829 102 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 GCGP01275 180 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 PFN1P07737 140 aaKnown RBP8.79□□□□□ -1
SLIRP-211ENST00000557623 SULT1A2P50226 295 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 TMEM183BQ1AE95 376 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 TMEM183AQ8IXX5 376 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 FMC1Q96HJ9 113 aa8.79□□□□□ -1
SLIRP-211ENST00000557623 SACSQ9NZJ4 4579 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 ALMS1Q8TCU4 4167 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 A0A1B0GV50 99 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 UBE2G1P62253 170 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 OR5I1Q13606 314 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 C9orf62Q8N4C0 152 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 LINC00479Q96M42 142 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 MDFICQ9P1T7 246 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 ZFP30Q9Y2G7 519 aa8.78□□□□□ -1
SLIRP-211ENST00000557623 RYR3Q15413 4870 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 TRAV1-1A0A0B4J248 108 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 TRBV6-1A0A0K0K1D8 114 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 TYMSP04818 313 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 AKR1C3P42330 323 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 ZNF80P51504 273 aaPredicted RBP8.77□□□□□ -1.01
SLIRP-211ENST00000557623 Q86TA4 180 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 UBE2DNLQ8IWF7 75 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 POM121L12Q8N7R1 296 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 MANBALQ9NQG1 85 aa8.77□□□□□ -1.01
SLIRP-211ENST00000557623 IGHV3-16A0A0C4DH30 117 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 FABP5P3A8MUU1 101 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 H3BNG1 76 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 GNRH2O43555 120 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 NUDT3O95989 172 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 S100A9P06702 114 aaKnown RBP8.76□□□□□ -1.01
SLIRP-211ENST00000557623 RNF212Q495C1 297 aa8.76□□□□□ -1.01
SLIRP-211ENST00000557623 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
SLIRP-211ENST00000557623 MUC4Q99102 2169 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 TRAV26-1A0A087WT03 109 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 A0A1B0GVG6 124 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 M0R2P5 195 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 HOXA5P20719 270 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 SLAQ13239 276 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 COX8CQ7Z4L0 72 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 RASL10AQ92737 203 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 TXNDC17Q9BRA2 123 aa8.75□□□□□ -1.01
SLIRP-211ENST00000557623 LTAP01374 205 aa8.74□□□□□ -1.01
SLIRP-211ENST00000557623 FAM3BP58499 235 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-211ENST00000557623 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
SLIRP-211ENST00000557623 NACAE9PAV3 2078 aa8.74□□□□□ -1.01
SLIRP-211ENST00000557623 RYR2Q92736 4967 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 A0A0J9YY99 117 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 IFNA1P01562 189 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 CCL18P55774 89 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 CCL20P78556 96 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 FAM162BQ5T6X4 162 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 ZC2HC1AQ96GY0 325 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
SLIRP-211ENST00000557623 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
SLIRP-211ENST00000557623 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
SLIRP-211ENST00000557623 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
SLIRP-211ENST00000557623 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
SLIRP-211ENST00000557623 TAGLN2P37802 199 aaKnown RBP8.72□□□□□ -1.01
SLIRP-211ENST00000557623 PRO0255Q9UI72 69 aa8.72□□□□□ -1.01
SLIRP-211ENST00000557623 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 SH2D1AO60880 128 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 ORM1P02763 201 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 S100A4P26447 101 aaKnown RBP8.71□□□□□ -1.02
SLIRP-211ENST00000557623 ASIPP42127 132 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 CRIP1P50238 77 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 ZNF674Q2M3X9 581 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 OR4C5Q8NGB2 326 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 C11orf52Q96A22 123 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 PTH2Q96A98 100 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 C9orf85Q96MD7 179 aa8.71□□□□□ -1.02
SLIRP-211ENST00000557623 HHLA3Q9XRX5 114 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms