RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TRAV21A0A0B4J279 112 aa11.43□□□□□ -0.58
NEDD1-210ENST00000557400 TAS2R45P59539 299 aa11.43□□□□□ -0.58
NEDD1-210ENST00000557400 LRRC37A5PQ49AS3 106 aa11.43□□□□□ -0.58
NEDD1-210ENST00000557400 CMTM2Q8TAZ6 248 aa11.43□□□□□ -0.58
NEDD1-210ENST00000557400 Q9HAA7 133 aa11.43□□□□□ -0.58
NEDD1-210ENST00000557400 H0YIZ8 118 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 J3QL48 77 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 SIX6O95475 246 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 PFN1P07737 140 aaKnown RBP11.42□□□□□ -0.58
NEDD1-210ENST00000557400 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 ATP5SQ99766 215 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 NMES1Q9C002 83 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 SDF2L1Q9HCN8 221 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
NEDD1-210ENST00000557400 FBLL1A6NHQ2 334 aaKnown RBP11.41□□□□□ -0.58
NEDD1-210ENST00000557400 TYMSP04818 313 aa11.41□□□□□ -0.58
NEDD1-210ENST00000557400 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
NEDD1-210ENST00000557400 MZT2BQ6NZ67 158 aa11.41□□□□□ -0.58
NEDD1-210ENST00000557400 FAM30AQ9NZY2 134 aa11.41□□□□□ -0.58
NEDD1-210ENST00000557400 RPH3ALQ9UNE2 315 aa11.41□□□□□ -0.58
NEDD1-210ENST00000557400 PGPA6NDG6 321 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 F6UZH7 168 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 C1QBP02746 253 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 GOLT1AQ6ZVE7 132 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 KCNS1Q96KK3 526 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 PRADC1Q9BSG0 188 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 TREM1Q9NP99 234 aa11.4□□□□□ -0.58
NEDD1-210ENST00000557400 CYCSP99999 105 aaKnown RBP11.39□□□□□ -0.59
NEDD1-210ENST00000557400 RHOHQ15669 191 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 LELP1Q5T871 98 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 ARL6IP6Q8N6S5 226 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 TVP23CQ96ET8 276 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
NEDD1-210ENST00000557400 TRAV8-1A0A0A6YYK1 113 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 TRBV6-4A0A1B0GX49 114 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 CIDEAO60543 219 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 EIF3GO75821 320 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEDD1-210ENST00000557400 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 LAGE3Q14657 143 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 ZNF876PQ49A33 203 aa11.38□□□□□ -0.59
NEDD1-210ENST00000557400 ASAH1Q13510 395 aa11.37□□□□□ -0.59
NEDD1-210ENST00000557400 CFAP126Q5VTH2 177 aa11.37□□□□□ -0.59
NEDD1-210ENST00000557400 SCGB1C1Q8TD33 95 aa11.37□□□□□ -0.59
NEDD1-210ENST00000557400 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
NEDD1-210ENST00000557400 HSPB11Q9Y547 144 aa11.37□□□□□ -0.59
NEDD1-210ENST00000557400 RS1O15537 224 aa11.36□□□□□ -0.59
NEDD1-210ENST00000557400 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
NEDD1-210ENST00000557400 DPPA3Q6W0C5 159 aa11.36□□□□□ -0.59
NEDD1-210ENST00000557400 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
NEDD1-210ENST00000557400 PPP1R1CQ8WVI7 109 aa11.36□□□□□ -0.59
NEDD1-210ENST00000557400 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
NEDD1-210ENST00000557400 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 GNG5P63218 68 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 WFDC2Q14508 124 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 Q6ZSA8 131 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 ATP6V0E2Q8NHE4 81 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 NDFIP1Q9BT67 221 aa11.35□□□□□ -0.59
NEDD1-210ENST00000557400 H2BFSP57053 126 aa11.34□□□□□ -0.59
NEDD1-210ENST00000557400 SMIM3Q9BZL3 60 aa11.34□□□□□ -0.59
NEDD1-210ENST00000557400 A0A1W2PPV4 95 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-210ENST00000557400 PET100P0DJ07 73 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 MGST1P10620 155 aaKnown RBP11.33□□□□□ -0.6
NEDD1-210ENST00000557400 ACOT6Q3I5F7 207 aaPredicted RBP11.33□□□□□ -0.6
NEDD1-210ENST00000557400 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 NDUFA13Q9P0J0 144 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
NEDD1-210ENST00000557400 TRAV8-3A0A0A6YYJ7 113 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 MPC2O95563 127 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
NEDD1-210ENST00000557400 ZNF506Q5JVG8 444 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 PTH2Q96A98 100 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 SH3BGRL3Q9H299 93 aa11.32□□□□□ -0.6
NEDD1-210ENST00000557400 TAAR5O14804 337 aa11.31□□□□□ -0.6
NEDD1-210ENST00000557400 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-210ENST00000557400 RAB2AP61019 212 aa11.31□□□□□ -0.6
NEDD1-210ENST00000557400 LINC00299Q6ZSB3 139 aa11.31□□□□□ -0.6
NEDD1-210ENST00000557400 Q8N3U1 123 aa11.31□□□□□ -0.6
NEDD1-210ENST00000557400 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
NEDD1-210ENST00000557400 DNAH8Q96JB1 4490 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 PGPEP1LA6NFU8 196 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 LECT2O14960 151 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 HMGB3O15347 200 aaKnown RBP11.3□□□□□ -0.6
NEDD1-210ENST00000557400 GCGP01275 180 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 TMEM75Q8N9X5 138 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 C5orf17Q8NAS9 161 aa11.3□□□□□ -0.6
NEDD1-210ENST00000557400 INMT-MINDY4F8WBC2 141 aa11.29□□□□□ -0.6
NEDD1-210ENST00000557400 TCRAP04437 139 aa11.29□□□□□ -0.6
NEDD1-210ENST00000557400 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
NEDD1-210ENST00000557400 RNASE3P12724 160 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms