RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MEF2BQ02080 365 aaPredicted RBP9.75□□□□□ -0.85
VPS33B-206ENST00000557358 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 RNF212Q495C1 297 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 MUC21Q5SSG8 566 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 CYB561D1Q8N8Q1 229 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 KCNS1Q96KK3 526 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
VPS33B-206ENST00000557358 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 EPDR1Q9UM22 224 aa9.75□□□□□ -0.85
VPS33B-206ENST00000557358 RAB19A4D1S5 217 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 LINC00862A6NCI5 91 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 CCL18P55774 89 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
VPS33B-206ENST00000557358 PRR9Q5T870 116 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 Q6ZTI0 123 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 COMMD7Q86VX2 200 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 SPXQ9BT56 116 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 DNAH1Q9P2D7 4330 aa9.74□□□□□ -0.85
VPS33B-206ENST00000557358 TRAV8-1A0A0A6YYK1 113 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 FLI1Q01543 452 aaPredicted RBP9.73□□□□□ -0.85
VPS33B-206ENST00000557358 SLAQ13239 276 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 TMEM183BQ1AE95 376 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 TMEM183AQ8IXX5 376 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 TMEM75Q8N9X5 138 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 HIST1H2BAQ96A08 127 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 TCEAL7Q9BRU2 100 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 SDF2L1Q9HCN8 221 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 KLF12Q9Y4X4 402 aa9.73□□□□□ -0.85
VPS33B-206ENST00000557358 TRAV26-1A0A087WT03 109 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 PDE6DO43924 150 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 SPINK4O60575 86 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 PEA15Q15121 130 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 C18orf15Q96N68 181 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 SMDT1Q9H4I9 107 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 TP53TG3Q9ULZ0 132 aa9.72□□□□□ -0.85
VPS33B-206ENST00000557358 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
VPS33B-206ENST00000557358 H3BNG1 76 aa9.71□□□□□ -0.86
VPS33B-206ENST00000557358 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
VPS33B-206ENST00000557358 TDRG1Q3Y452 100 aa9.71□□□□□ -0.86
VPS33B-206ENST00000557358 SGK494Q96LW2 274 aa9.71□□□□□ -0.86
VPS33B-206ENST00000557358 HYDINQ4G0P3 5121 aa9.71□□□□□ -0.86
VPS33B-206ENST00000557358 MUC4Q99102 2169 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 PEX7O00628 323 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 AKR1C3P42330 323 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 UBE2G1P62253 170 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 SRSF3P84103 164 aaKnown RBP9.7□□□□□ -0.86
VPS33B-206ENST00000557358 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 UQCC3Q6UW78 93 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 C11orf52Q96A22 123 aa9.7□□□□□ -0.86
VPS33B-206ENST00000557358 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
VPS33B-206ENST00000557358 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
VPS33B-206ENST00000557358 A0A0J9YY99 117 aa9.69□□□□□ -0.86
VPS33B-206ENST00000557358 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
VPS33B-206ENST00000557358 GCGP01275 180 aa9.69□□□□□ -0.86
VPS33B-206ENST00000557358 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
VPS33B-206ENST00000557358 SRP19P09132 144 aaKnown RBP9.69□□□□□ -0.86
VPS33B-206ENST00000557358 NDUFA5Q16718 116 aa9.69□□□□□ -0.86
VPS33B-206ENST00000557358 M0R2P5 195 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 CEBPGP53567 150 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 Q6ZQT7 251 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 FMC1Q96HJ9 113 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 ZFP30Q9Y2G7 519 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
VPS33B-206ENST00000557358 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 PAX4O43316 350 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 RASL10AQ92737 203 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 TVP23CQ96ET8 276 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 C8orf49Q96NF6 230 aa9.67□□□□□ -0.86
VPS33B-206ENST00000557358 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 TRAV34A0A0B4J273 112 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 C9JQL5 133 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 M0R2N4 97 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 GNRH2O43555 120 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 TYMSP04818 313 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 S100A9P06702 114 aaKnown RBP9.66□□□□□ -0.86
VPS33B-206ENST00000557358 HOXA5P20719 270 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 S100A4P26447 101 aaKnown RBP9.66□□□□□ -0.86
VPS33B-206ENST00000557358 LINC00336Q6ZUF6 198 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 OR4C5Q8NGB2 326 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 PARLQ9H300 379 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 HHLA3Q9XRX5 114 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 ICOSQ9Y6W8 199 aa9.66□□□□□ -0.86
VPS33B-206ENST00000557358 KMT2AQ03164 3969 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 TRAV4A0A0B4J268 109 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 SFTA3P0C7M3 94 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 RPL35P42766 123 aaKnown RBP9.65□□□□□ -0.86
VPS33B-206ENST00000557358 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
VPS33B-206ENST00000557358 Q86TA4 180 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms