RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
SYNE2-226ENST00000557084 MUC4Q99102 2169 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 TRGV4A0A0C4DH28 118 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 KANTRA0A1W2PQU2 76 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 MAP1LC3B2A6NCE7 125 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 GCGP01275 180 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 FLI1Q01543 452 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-226ENST00000557084 ZNF345Q14585 488 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 ZNF726P1Q15940 193 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 TDRG1Q3Y452 100 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 SMUG1Q53HV7 270 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 C1orf134Q5TEV5 83 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 KCNRGQ8N5I3 272 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 TVP23CQ96ET8 276 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 MAP1LC3BQ9GZQ8 125 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 CYTL1Q9NRR1 136 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 PRO0255Q9UI72 69 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 HHLA3Q9XRX5 114 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 HECTD4Q9Y4D8 3996 aa8.31□□□□□ -1.08
SYNE2-226ENST00000557084 A0A0D9SG52 128 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 PRSS29PA6NIE9 313 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 GNRH2O43555 120 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 PFDN1O60925 122 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
SYNE2-226ENST00000557084 Q6ZR54 194 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 TMEM75Q8N9X5 138 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 C8orf49Q96NF6 230 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 ZNF471Q9BX82 626 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-226ENST00000557084 ICOSQ9Y6W8 199 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
SYNE2-226ENST00000557084 IGHV3-16A0A0C4DH30 117 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 M0R2P5 195 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 PFN1P07737 140 aaKnown RBP8.29□□□□□ -1.08
SYNE2-226ENST00000557084 CST9LP1Q5W188 147 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
SYNE2-226ENST00000557084 RASL10AQ92737 203 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 HIST1H2BAQ96A08 127 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 VSIG2Q96IQ7 327 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 Q9H8V8 135 aa8.29□□□□□ -1.08
SYNE2-226ENST00000557084 A0A096LPF7 62 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 TRAV34A0A0B4J273 112 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 FAM74A7A6NL05 159 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 UMAD1C9J7I0 102 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 PEX7O00628 323 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 RTL8CO15255 209 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 BCL2L11O43521 198 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 TYMSP04818 313 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 SFTA3P0C7M3 94 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 ESRGQ1W209 222 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 OR4C5Q8NGB2 326 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 FAM213BQ8TBF2 198 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 SFT2D1Q8WV19 159 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 LINC00479Q96M42 142 aa8.28□□□□□ -1.08
SYNE2-226ENST00000557084 NACAE9PAV3 2078 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 C9JCJ5 164 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 IGLV2-11P01706 119 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 SEC11BP0C7V7 166 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 ZNF80P51504 273 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-226ENST00000557084 CRYBA4P53673 196 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 UBE2G1P62253 170 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 FHL2Q14192 279 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
SYNE2-226ENST00000557084 OR11H4Q8NGC9 324 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 ZNF479Q96JC4 524 aa8.27□□□□□ -1.09
SYNE2-226ENST00000557084 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
SYNE2-226ENST00000557084 hCG_2014768A0A024R1R8 64 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 A0A1B0GV50 99 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 GHRHP01286 108 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 S100A4P26447 101 aaKnown RBP8.26□□□□□ -1.09
SYNE2-226ENST00000557084 FHITP49789 147 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 TMUB2Q71RG4 321 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 ARL2-SNX15V9GYD0 113 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
SYNE2-226ENST00000557084 FABP5P3A8MUU1 101 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 ORM1P02763 201 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 TPT1P13693 172 aaKnown RBP8.25□□□□□ -1.09
SYNE2-226ENST00000557084 GYPEP15421 78 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 SRIP30626 198 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 Q86TA4 180 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 FMC1Q96HJ9 113 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 TCEAL7Q9BRU2 100 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 UPK3BQ9BT76 320 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 ZFP30Q9Y2G7 519 aa8.25□□□□□ -1.09
SYNE2-226ENST00000557084 PAGE4O60829 102 aa8.24□□□□□ -1.09
SYNE2-226ENST00000557084 AKR1C3P42330 323 aa8.24□□□□□ -1.09
SYNE2-226ENST00000557084 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
SYNE2-226ENST00000557084 DPPA3Q6W0C5 159 aa8.24□□□□□ -1.09
SYNE2-226ENST00000557084 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
SYNE2-226ENST00000557084 TXNDC17Q9BRA2 123 aa8.24□□□□□ -1.09
SYNE2-226ENST00000557084 C11orf21Q9P2W6 132 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms