RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 METTL26Q96S19 204 aa8.7□□□□□ -1.02
SRP54-213ENST00000556994 COL12A1Q99715 3063 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 OOSP1A8MZH6 123 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 C11orf71Q6IPW1 123 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 C20orf173Q96LM9 149 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 SIRPDQ9H106 197 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 SAA4P35542 130 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 FOXC1Q12948 553 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 C9orf47Q6ZRZ4 202 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 C1orf122Q6ZSJ8 110 aa8.69□□□□□ -1.02
SRP54-213ENST00000556994 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
SRP54-213ENST00000556994 PRSS47A8MTI9 375 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 TMEM219Q86XT9 240 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 C14orf178Q8N769 122 aaPredicted RBP8.68□□□□□ -1.02
SRP54-213ENST00000556994 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 SMIM2Q9BVW6 85 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 H7C1H1 209 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 ADORA2A-AS1P86434 159 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 FBXL19-AS1Q494R0 122 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 EEF1AKMT3Q96AZ1 226 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 HIF1ANQ9NWT6 349 aa8.68□□□□□ -1.02
SRP54-213ENST00000556994 CHTOPQ9Y3Y2 248 aaKnown RBP8.68□□□□□ -1.02
SRP54-213ENST00000556994 TSSC4Q9Y5U2 329 aaPredicted RBP8.68□□□□□ -1.02
SRP54-213ENST00000556994 A0A1W2PPR1 153 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 F8VRH5 84 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 K7ENP7 123 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 HLA-DRB4P13762 266 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 PLNP26678 52 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 RASL10AQ92737 203 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 HLA-DRB4X5D2U9 266 aa8.67□□□□□ -1.02
SRP54-213ENST00000556994 IGKV3-7A0A075B6H7 116 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 IGHV3OR16-10A0A075B7F0 116 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 AZU1P20160 251 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 SAMD13Q5VXD3 122 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 SPANXB1Q9NS25 103 aaPredicted RBP8.66□□□□□ -1.02
SRP54-213ENST00000556994 MAP1AP78559 2803 aaPredicted RBP8.66□□□□□ -1.02
SRP54-213ENST00000556994 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 OR11H12B2RN74 326 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 MGPP08493 103 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 S100A4P26447 101 aaKnown RBP8.66□□□□□ -1.02
SRP54-213ENST00000556994 SUMO2P61956 95 aaKnown RBP8.66□□□□□ -1.02
SRP54-213ENST00000556994 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 OR11H1Q8NG94 326 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 GLMPQ8WWB7 406 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 IGF2RP11717 2491 aa8.66□□□□□ -1.02
SRP54-213ENST00000556994 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 F8W1H4 67 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 UBE2E1P51965 193 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 ATP5G2Q06055 141 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 SFTA2Q6UW10 78 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 MRAP2Q96G30 205 aa8.65□□□□□ -1.02
SRP54-213ENST00000556994 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 CENPVL3A0A0U1RRI6 287 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 F6UB75 175 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 TRBV12-3P01733 135 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 INSL3P51460 131 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 TAL2Q16559 108 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 UNQ9165/PRO28630Q6UXU0 137 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 NEXN-AS1Q8NBZ9 246 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 TOMM6Q96B49 74 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 U3KQE9 123 aa8.65□□□□□ -1.03
SRP54-213ENST00000556994 TRAV12-1A0A0B4J245 112 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 GNRH2O43555 120 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 RRN3P1Q2M238 152 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 ZFAND2AQ8N6M9 145 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 MRPL53Q96EL3 112 aaKnown RBP8.64□□□□□ -1.03
SRP54-213ENST00000556994 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
SRP54-213ENST00000556994 PHLDA3Q9Y5J5 127 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 LGALS1P09382 135 aaKnown RBP8.64□□□□□ -1.03
SRP54-213ENST00000556994 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
SRP54-213ENST00000556994 EMP1P54849 157 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 RPL11P62913 178 aaKnown RBP8.64□□□□□ -1.03
SRP54-213ENST00000556994 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 GAGE13Q4V321 117 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 SIGMAR1Q99720 223 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 RAXQ9Y2V3 346 aa8.64□□□□□ -1.03
SRP54-213ENST00000556994 SPTAN1Q13813 2472 aaKnown RBP8.63□□□□□ -1.03
SRP54-213ENST00000556994 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 C5orf56Q8N8D9 126 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 KLHL30-AS1Q8NEE0 82 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 ITLN2Q8WWU7 325 aaPredicted RBP8.63□□□□□ -1.03
SRP54-213ENST00000556994 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 PRADC1Q9BSG0 188 aa8.63□□□□□ -1.03
SRP54-213ENST00000556994 HOXA3O43365 443 aaPredicted RBP8.63□□□□□ -1.03
SRP54-213ENST00000556994 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
SRP54-213ENST00000556994 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
SRP54-213ENST00000556994 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms