RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FABP5P3A8MUU1 101 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 GNRH2O43555 120 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 GCGP01275 180 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 PFN1P07737 140 aaKnown RBP7.52□□□□□ -1.21
LINC00239-201ENST00000556973 P0DMU3 169 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 FAM231AP0DMU4 169 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 FAM231CP0DMU5 169 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 ZNF80P51504 273 aaPredicted RBP7.52□□□□□ -1.21
LINC00239-201ENST00000556973 UBE2G1P62253 170 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 TMEM183BQ1AE95 376 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 TMEM183AQ8IXX5 376 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 FMC1Q96HJ9 113 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 SDF2L1Q9HCN8 221 aa7.52□□□□□ -1.21
LINC00239-201ENST00000556973 TYMSP04818 313 aa7.51□□□□□ -1.21
LINC00239-201ENST00000556973 S100A9P06702 114 aaKnown RBP7.51□□□□□ -1.21
LINC00239-201ENST00000556973 CCL20P78556 96 aa7.51□□□□□ -1.21
LINC00239-201ENST00000556973 OR5I1Q13606 314 aa7.51□□□□□ -1.21
LINC00239-201ENST00000556973 MANBALQ9NQG1 85 aa7.51□□□□□ -1.21
LINC00239-201ENST00000556973 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
LINC00239-201ENST00000556973 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 COX8CQ7Z4L0 72 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 Q86TA4 180 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 RASL10AQ92737 203 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 TXNDC17Q9BRA2 123 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
LINC00239-201ENST00000556973 GNG13Q9P2W3 67 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 RYR3Q15413 4870 aa7.5□□□□□ -1.21
LINC00239-201ENST00000556973 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 H3BNG1 76 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 M0R2P5 195 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 LTAP01374 205 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 HOXA5P20719 270 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 AKR1C3P42330 323 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 RNF212Q495C1 297 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
LINC00239-201ENST00000556973 TRAV26-1A0A087WT03 109 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 SCO2A0A1W2PP80 73 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 NUDT3O95989 172 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 IFNA1P01562 189 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 CRIP1P50238 77 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 SLAQ13239 276 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 FAM162BQ5T6X4 162 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 SACSQ9NZJ4 4579 aa7.48□□□□□ -1.21
LINC00239-201ENST00000556973 DNAH1Q9P2D7 4330 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 ORM1P02763 201 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 TAGLN2P37802 199 aaKnown RBP7.47□□□□□ -1.21
LINC00239-201ENST00000556973 NKX2-5P52952 324 aaPredicted RBP7.47□□□□□ -1.21
LINC00239-201ENST00000556973 BLOC1S1P78537 153 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 ALKAL2Q6UX46 152 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 BAGE2Q86Y30 109 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 UBE2DNLQ8IWF7 75 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 ZC2HC1AQ96GY0 325 aa7.47□□□□□ -1.21
LINC00239-201ENST00000556973 A0A0J9YY99 117 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 B4DEV8 164 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 PDE6DO43924 150 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 SH2D1AO60880 128 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 CCL18P55774 89 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.22
LINC00239-201ENST00000556973 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
LINC00239-201ENST00000556973 FHL2Q14192 279 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 ZNF674Q2M3X9 581 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 ZNF876PQ49A33 203 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 C11orf52Q96A22 123 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 PTH2Q96A98 100 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 PRO0255Q9UI72 69 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 VAX2Q9UIW0 290 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 HHLA3Q9XRX5 114 aa7.46□□□□□ -1.22
LINC00239-201ENST00000556973 RYR2Q92736 4967 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 TRAV4A0A0B4J268 109 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 TRGV4A0A0C4DH28 118 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 KRBOX1C9JBD0 128 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 PAX4O43316 350 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 CIDEAO60543 219 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 IGHV3-53P01767 116 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
LINC00239-201ENST00000556973 S100A4P26447 101 aaKnown RBP7.45□□□□□ -1.22
LINC00239-201ENST00000556973 DNLZQ5SXM8 178 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 OR4C5Q8NGB2 326 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 BOLA1Q9Y3E2 137 aa7.45□□□□□ -1.22
LINC00239-201ENST00000556973 C9JCJ5 164 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 BCL2P10415 239 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 ASIPP42127 132 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
LINC00239-201ENST00000556973 CRYBA4P53673 196 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 NHLRC2Q8NBF2 726 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 LYPD6BQ8NI32 183 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 IL36BQ9NZH7 164 aa7.44□□□□□ -1.22
LINC00239-201ENST00000556973 A0A096LPF7 62 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 PGPEP1LA6NFU8 196 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 M0R036 132 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 LINC01559Q495D7 138 aa7.43□□□□□ -1.22
LINC00239-201ENST00000556973 PIK3CD-AS1Q5SR53 167 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms