RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TMUB2Q71RG4 321 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 FAM213BQ8TBF2 198 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 DNAH2Q9P225 4427 aa7.23□□□□□ -1.25
SNX6-208ENST00000556712 MUC4Q99102 2169 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 IGHV3-16A0A0C4DH30 117 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 SFTA3P0C7M3 94 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 SEC11BP0C7V7 166 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 RNF212Q495C1 297 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 Q86TA4 180 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 VSIG2Q96IQ7 327 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 C18orf15Q96N68 181 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 LINC00588Q9Y4M8 146 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 ARL2-SNX15V9GYD0 113 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 BIRC6Q9NR09 4857 aa7.22□□□□□ -1.25
SNX6-208ENST00000556712 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.26
SNX6-208ENST00000556712 LGALS9BQ3B8N2 356 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 TDRG1Q3Y452 100 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 LGALSLQ3ZCW2 172 aaPredicted RBP7.21□□□□□ -1.26
SNX6-208ENST00000556712 ZFP69Q49AA0 526 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 TCTE3Q8IZS6 198 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 SDF2L1Q9HCN8 221 aa7.21□□□□□ -1.26
SNX6-208ENST00000556712 PAGE4O60829 102 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 PFN1P07737 140 aaKnown RBP7.2□□□□□ -1.26
SNX6-208ENST00000556712 SMUG1Q53HV7 270 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 CST9LP1Q5W188 147 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 ZNRF2Q8NHG8 242 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 STOML3Q8TAV4 291 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 SFT2D1Q8WV19 159 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 ZNF479Q96JC4 524 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 FAT2Q9NYQ8 4349 aa7.2□□□□□ -1.26
SNX6-208ENST00000556712 A0A096LPF7 62 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 UMAD1C9J7I0 102 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 PPT1P50897 306 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 CCL18P55774 89 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 FHL2Q14192 279 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 Q6ZR54 194 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 HIST1H2BAQ96A08 127 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 SPXQ9BT56 116 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
SNX6-208ENST00000556712 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 FBLL1A6NHQ2 334 aaKnown RBP7.18□□□□□ -1.26
SNX6-208ENST00000556712 C9JCJ5 164 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 H3BNG1 76 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 M0R2P5 195 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 RTL8CO15255 209 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 PAX4O43316 350 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 C1QBP02746 253 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 H2AFB1P0C5Y9 115 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 CRYBA4P53673 196 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 UBE2G1P62253 170 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 EIF5AP63241 154 aaKnown RBP7.18□□□□□ -1.26
SNX6-208ENST00000556712 ESRGQ1W209 222 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 DPPA3Q6W0C5 159 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 AKAP14Q86UN6 197 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 NHLRC2Q8NBF2 726 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 RASL10AQ92737 203 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 ZC2HC1AQ96GY0 325 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 KCNS1Q96KK3 526 aa7.18□□□□□ -1.26
SNX6-208ENST00000556712 NKX6-2Q9C056 277 aaPredicted RBP7.18□□□□□ -1.26
SNX6-208ENST00000556712 TRAV4A0A0B4J268 109 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 IGKV3D-20A0A0C4DH25 116 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 AKR1C3P42330 323 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 FAM3BP58499 235 aaPredicted RBP7.17□□□□□ -1.26
SNX6-208ENST00000556712 FMC1Q96HJ9 113 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 PRO0255Q9UI72 69 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 HHLA3Q9XRX5 114 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 ICOSQ9Y6W8 199 aa7.17□□□□□ -1.26
SNX6-208ENST00000556712 LOC100131303A0A0U1RQF7 123 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 NBDYA0A0U1RRE5 68 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 A0A1B0GVG6 124 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 PGPEP1LA6NFU8 196 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 M0R036 132 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 RNASE3P12724 160 aaKnown RBP7.16□□□□□ -1.26
SNX6-208ENST00000556712 CRIP1P50238 77 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 CCL20P78556 96 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 C9orf62Q8N4C0 152 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 OR4C5Q8NGB2 326 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
SNX6-208ENST00000556712 MRPS16Q9Y3D3 137 aaKnown RBP7.16□□□□□ -1.26
SNX6-208ENST00000556712 TMSB15BA0A087X1C1 80 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 IGHV3-73A0A0B4J1V6 119 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 B4DEV8 164 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 H3BVH4 76 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 SH2D1AO60880 128 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 LTAP01374 205 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 ORM1P02763 201 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 ZNF506Q5JVG8 444 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 TCEAL7Q9BRU2 100 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 GNG13Q9P2W3 67 aa7.15□□□□□ -1.26
SNX6-208ENST00000556712 TRBV6-1A0A0K0K1D8 114 aa7.14□□□□□ -1.27
SNX6-208ENST00000556712 GRIFINA4D1Z8 144 aa7.14□□□□□ -1.27
SNX6-208ENST00000556712 FABP5P3A8MUU1 101 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms