RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SHANK2-AS3Q9BTD1 123 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 SLC25A39Q9BZJ4 359 aaPredicted RBP3.81□□□□□ -1.8
SRP54-211ENST00000556445 OTORQ9NRC9 128 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 OSTCQ9NRP0 149 aa3.81□□□□□ -1.8
SRP54-211ENST00000556445 DMXL2Q8TDJ6 3036 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 IGHV3-21A0A0B4J1V1 117 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 TRAV41A0A0B4J266 112 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 PGPA6NDG6 321 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 GGTLC3B5MD39 225 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 PEX7O00628 323 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 ISLRO14498 428 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 GGCTO75223 188 aaKnown RBP3.8□□□□□ -1.8
SRP54-211ENST00000556445 ZNF253O75346 499 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 IGHV3-48P01763 117 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 IGHG2P01859 326 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 PPBPP02775 128 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 IL4P05112 153 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 RNF224P0DH78 156 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 RPL7P18124 248 aaKnown RBP3.8□□□□□ -1.8
SRP54-211ENST00000556445 CRYBB3P26998 211 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
SRP54-211ENST00000556445 NDPQ00604 133 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 PSG9Q00887 426 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 SMAGPQ0VAQ4 97 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 TMEM183BQ1AE95 376 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 C1orf195Q5TG92 126 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 ZNF343Q6P1L6 599 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 FMC1Q96HJ9 113 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 USMG5Q96IX5 58 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 HIST1H4GQ99525 98 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 FAM103A1Q9BTL3 118 aaKnown RBP3.8□□□□□ -1.8
SRP54-211ENST00000556445 MRPL36Q9P0J6 103 aaKnown RBP3.8□□□□□ -1.8
SRP54-211ENST00000556445 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 RABAC1Q9UI14 185 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 EPDR1Q9UM22 224 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 LOC400499M0QZD8 3231 aa3.8□□□□□ -1.8
SRP54-211ENST00000556445 DSPP15924 2871 aaKnown RBP3.79□□□□□ -1.8
SRP54-211ENST00000556445 TRAV5A0A0B4J249 113 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 TRBV6-1A0A0K0K1D8 114 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 A6NDX4 124 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 ZNF98A6NK75 572 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 J3QKU1 62 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 AMBPP02760 352 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 S100A8P05109 93 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 LINC00614P0C842 121 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 PYYP10082 97 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 SCGB1A1P11684 91 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 IGLL1P15814 213 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 CSN1S1P47710 185 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 RHOGP84095 191 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 ATP5G2Q06055 141 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 C15orf32Q32M92 178 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 CENPWQ5EE01 88 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 C1orf194Q5T5A4 169 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 Q6ZRP5 223 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 BAGE2Q86Y30 109 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 TMEM86BQ8N661 226 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 STPG4Q8N801 248 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 SIGMAR1Q99720 223 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 HSPB9Q9BQS6 159 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 DERL1Q9BUN8 251 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 Q9H3A6 140 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 IL36BQ9NZH7 164 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 ZFP30Q9Y2G7 519 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 AKAP6Q13023 2319 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 CELSR3Q9NYQ7 3312 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 MED13LQ71F56 2210 aa3.79□□□□□ -1.8
SRP54-211ENST00000556445 TRBV20OR9-2A0A075B6H5 130 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 TRBV19A0A075B6N1 114 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 IGHV3OR16-13A0A075B7E8 117 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 A0A096LNT2 108 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 OR2T8A6NH00 312 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 H3BUX3 64 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 CRLF1O75462 422 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 MT-ND6P03923 174 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 TRGV3P03979 118 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 TCRAP04437 139 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 CTSGP08311 255 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 CXCL1P09341 107 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 MGST1P10620 155 aaKnown RBP3.78□□□□□ -1.8
SRP54-211ENST00000556445 PRR3P79522 188 aaKnown RBP3.78□□□□□ -1.8
SRP54-211ENST00000556445 IBA57Q5T440 356 aaKnown RBP3.78□□□□□ -1.8
SRP54-211ENST00000556445 CYB5R2Q6BCY4 276 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 RASL11AQ6T310 242 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 BRD3OSQ6XYD6 125 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 OR4B1Q8NGF8 309 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 OR10J6PQ8NGY7 276 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 BLNKQ8WV28 456 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 IGF2BP2-AS1Q96M15 143 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 METTL26Q96S19 204 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 SLC50A1Q9BRV3 221 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 SOX21Q9Y651 276 aaPredicted RBP3.78□□□□□ -1.8
SRP54-211ENST00000556445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.78□□□□□ -1.84e-8■■■■■ 27.5
SRP54-211ENST00000556445 ABCA1O95477 2261 aa3.78□□□□□ -1.8
SRP54-211ENST00000556445 SPTAN1Q13813 2472 aaKnown RBP3.77□□□□□ -1.81
SRP54-211ENST00000556445 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms