RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 WI2-2373I1.2A0A1W2PRP0 233 aa11.84□□□□□ -0.51
LRP1-211ENST00000556356 E7EUB6 86 aa11.84□□□□□ -0.51
LRP1-211ENST00000556356 SNAI2O43623 268 aa11.84□□□□□ -0.51
LRP1-211ENST00000556356 C14orf144Q96I85 54 aa11.83□□□□□ -0.51
LRP1-211ENST00000556356 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.51
LRP1-211ENST00000556356 PAX4O43316 350 aa11.83□□□□□ -0.52
LRP1-211ENST00000556356 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
LRP1-211ENST00000556356 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
LRP1-211ENST00000556356 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
LRP1-211ENST00000556356 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
LRP1-211ENST00000556356 COLCA2A8K830 154 aa11.83□□□□□ -0.52
LRP1-211ENST00000556356 FANCD2OSQ96PS1 177 aa11.83□□□□□ -0.52
LRP1-211ENST00000556356 I3L3M4 83 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 SRSF2Q01130 221 aaKnown RBP11.82□□□□□ -0.52
LRP1-211ENST00000556356 CFHR4Q92496 578 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 IGHV3-64A0A075B6Q5 118 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 LINC00158P58513 81 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
LRP1-211ENST00000556356 IGF1P05019 195 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 IGF2BP2-AS1Q96M15 143 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
LRP1-211ENST00000556356 LINC00587B1AMM8 73 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 LTAP01374 205 aa11.82□□□□□ -0.52
LRP1-211ENST00000556356 SMAD5-AS1Q9Y6J3 95 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 PATE2Q6UY27 113 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 ZNF493Q6ZR52 646 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 C9JQL5 133 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 PLEKHB2Q96CS7 222 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 CEP295Q9C0D2 2601 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 U3KQE9 123 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 ARHGAP21Q5T5U3 1957 aa11.81□□□□□ -0.52
LRP1-211ENST00000556356 RHOHQ15669 191 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
LRP1-211ENST00000556356 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 PLNP26678 52 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 SDHAF1A6NFY7 115 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 EBI3Q14213 229 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 UTF1Q5T230 341 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 PROP1O75360 226 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
LRP1-211ENST00000556356 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
LRP1-211ENST00000556356 LINC01548A6NM66 108 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 SHISA2Q6UWI4 295 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 Q6ZSV7 163 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 RMI2Q96E14 147 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 GAGE10A6NGK3 116 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 HIVEP3Q5T1R4 2406 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 V9GYV3 84 aa11.79□□□□□ -0.52
LRP1-211ENST00000556356 GNRH2O43555 120 aa11.78□□□□□ -0.52
LRP1-211ENST00000556356 ADCYAP1P18509 176 aa11.78□□□□□ -0.52
LRP1-211ENST00000556356 KRTAP10-9P60411 292 aa11.78□□□□□ -0.52
LRP1-211ENST00000556356 NAV3Q8IVL0 2385 aa11.78□□□□□ -0.52
LRP1-211ENST00000556356 TMEM61Q8N0U2 210 aa11.77□□□□□ -0.52
LRP1-211ENST00000556356 UNQ9165/PRO28630Q6UXU0 137 aa11.77□□□□□ -0.52
LRP1-211ENST00000556356 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
LRP1-211ENST00000556356 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
LRP1-211ENST00000556356 Q6ZPA2 131 aa11.77□□□□□ -0.53
LRP1-211ENST00000556356 Q8N8P6 123 aa11.77□□□□□ -0.53
LRP1-211ENST00000556356 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.53
LRP1-211ENST00000556356 TP53TG1Q9Y2A0 90 aa11.77□□□□□ -0.53
LRP1-211ENST00000556356 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
LRP1-211ENST00000556356 SLC25A20O43772 301 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 GAGE6Q13070 117 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 MRPL51Q4U2R6 128 aaKnown RBP11.76□□□□□ -0.53
LRP1-211ENST00000556356 COL4A2P08572 1712 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 A8MWP6 167 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 A0A096LPF7 62 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 A0A0J9YY99 117 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 SMIM27A0A1W2PRY6 76 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 EREGO14944 169 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 GHRHP01286 108 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
LRP1-211ENST00000556356 ATP5G1P05496 136 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
LRP1-211ENST00000556356 P0C879 139 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 CTAG1AP78358 180 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 BBC3Q96PG8 261 aaPredicted RBP11.75□□□□□ -0.53
LRP1-211ENST00000556356 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
LRP1-211ENST00000556356 TRAV26-2A0A0B4J265 109 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 TMEM141Q96I45 108 aa11.75□□□□□ -0.53
LRP1-211ENST00000556356 S100A7L2Q5SY68 101 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 HIST1H2BLQ99880 126 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 MTURNQ8N3F0 131 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 IGKV1OR2-108A0A075B7D4 117 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 PCP4P48539 62 aa11.74□□□□□ -0.53
LRP1-211ENST00000556356 C1orf229Q6ZS94 237 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms