RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PPT1P50897 306 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 LGALS9BQ3B8N2 356 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 ZFP69Q49AA0 526 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 SMUG1Q53HV7 270 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 C18orf15Q96N68 181 aa10.65□□□□□ -0.7
ACTN1-217ENST00000556203 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 PAGE4O60829 102 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 TYMSP04818 313 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 PFN1P07737 140 aaKnown RBP10.64□□□□□ -0.71
ACTN1-217ENST00000556203 EIF5AL1Q6IS14 154 aaKnown RBP10.64□□□□□ -0.71
ACTN1-217ENST00000556203 Q86TA4 180 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 ARL2-SNX15V9GYD0 113 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 KMT2AQ03164 3969 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 VPS13DQ5THJ4 4388 aa10.64□□□□□ -0.71
ACTN1-217ENST00000556203 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
ACTN1-217ENST00000556203 A0A0J9YY99 117 aa10.63□□□□□ -0.71
ACTN1-217ENST00000556203 SLC51BQ86UW2 128 aa10.63□□□□□ -0.71
ACTN1-217ENST00000556203 KCNS1Q96KK3 526 aa10.63□□□□□ -0.71
ACTN1-217ENST00000556203 TCEAL7Q9BRU2 100 aa10.63□□□□□ -0.71
ACTN1-217ENST00000556203 IGHV3-53P01767 116 aa10.62□□□□□ -0.71
ACTN1-217ENST00000556203 RAB5CP51148 216 aa10.62□□□□□ -0.71
ACTN1-217ENST00000556203 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
ACTN1-217ENST00000556203 SPXQ9BT56 116 aa10.62□□□□□ -0.71
ACTN1-217ENST00000556203 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
ACTN1-217ENST00000556203 A0A1B0GVG6 124 aa10.61□□□□□ -0.71
ACTN1-217ENST00000556203 AKR1C3P42330 323 aa10.61□□□□□ -0.71
ACTN1-217ENST00000556203 UBE2G1P62253 170 aa10.61□□□□□ -0.71
ACTN1-217ENST00000556203 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
ACTN1-217ENST00000556203 SULT1A2P50226 295 aa10.6□□□□□ -0.71
ACTN1-217ENST00000556203 RNF212Q495C1 297 aa10.6□□□□□ -0.71
ACTN1-217ENST00000556203 RASL10AQ92737 203 aa10.6□□□□□ -0.71
ACTN1-217ENST00000556203 SCO2A0A1W2PP80 73 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 H3BNG1 76 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 M0R2P5 195 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 CCL20P78556 96 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 GNG13Q9P2W3 67 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 ZFP30Q9Y2G7 519 aa10.59□□□□□ -0.71
ACTN1-217ENST00000556203 EPPK1P58107 5090 aaKnown RBP10.58□□□□□ -0.72
ACTN1-217ENST00000556203 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
ACTN1-217ENST00000556203 TRBV6-1A0A0K0K1D8 114 aa10.58□□□□□ -0.72
ACTN1-217ENST00000556203 FABP5P3A8MUU1 101 aa10.58□□□□□ -0.72
ACTN1-217ENST00000556203 LTAP01374 205 aa10.58□□□□□ -0.72
ACTN1-217ENST00000556203 ZC2HC1AQ96GY0 325 aa10.58□□□□□ -0.72
ACTN1-217ENST00000556203 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 TEX46H3BTG2 121 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 M0R2N4 97 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 SFTA3P0C7M3 94 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 CCL18P55774 89 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 FHL2Q14192 279 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 ZNF479Q96JC4 524 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
ACTN1-217ENST00000556203 DNAH6Q9C0G6 4158 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 PAX4O43316 350 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 CRIP1P50238 77 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 FAM3BP58499 235 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-217ENST00000556203 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 LINC00588Q9Y4M8 146 aa10.56□□□□□ -0.72
ACTN1-217ENST00000556203 A0A096LPF7 62 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 TRAV4A0A0B4J268 109 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 C9JCJ5 164 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 SH2D1AO60880 128 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 ORM1P02763 201 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
ACTN1-217ENST00000556203 NKX2-5P52952 324 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-217ENST00000556203 CRYBA4P53673 196 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 SLAQ13239 276 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 NHLRC2Q8NBF2 726 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 OR4C5Q8NGB2 326 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
ACTN1-217ENST00000556203 B4DEV8 164 aa10.54□□□□□ -0.72
ACTN1-217ENST00000556203 M0R036 132 aa10.54□□□□□ -0.72
ACTN1-217ENST00000556203 RNASE3P12724 160 aaKnown RBP10.54□□□□□ -0.72
ACTN1-217ENST00000556203 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
ACTN1-217ENST00000556203 ASIPP42127 132 aa10.54□□□□□ -0.72
ACTN1-217ENST00000556203 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
ACTN1-217ENST00000556203 ESRGQ1W209 222 aa10.53□□□□□ -0.72
ACTN1-217ENST00000556203 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
ACTN1-217ENST00000556203 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
ACTN1-217ENST00000556203 ZNRF2Q8NHG8 242 aa10.53□□□□□ -0.72
ACTN1-217ENST00000556203 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
ACTN1-217ENST00000556203 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 IFNA1P01562 189 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 C11orf52Q96A22 123 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 MUC4Q99102 2169 aa10.52□□□□□ -0.73
ACTN1-217ENST00000556203 GRIFINA4D1Z8 144 aa10.51□□□□□ -0.73
ACTN1-217ENST00000556203 H3BVH4 76 aa10.51□□□□□ -0.73
ACTN1-217ENST00000556203 BCL2P10415 239 aa10.51□□□□□ -0.73
ACTN1-217ENST00000556203 RPL35P42766 123 aaKnown RBP10.51□□□□□ -0.73
ACTN1-217ENST00000556203 LINC01559Q495D7 138 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms