RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	NUTF2	P61970	127 aa	Known RBP	4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	ACTL10	Q5JWF8	245 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	ADAMTSL5	Q6ZMM2	481 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	COX8C	Q7Z4L0	72 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	ODF3	Q96PU9	254 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	CITED1	Q99966	193 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	TPPP3	Q9BW30	176 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	DKK2	Q9UBU2	259 aa		4.15	□□□□□ -1.75
ATL1-208	ENST00000556067	TMSB15B	A0A087X1C1	80 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067		A0A1B0GW15	77 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067		F6UB75	175 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067		J3KRW8	73 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	IGKV3-20	P01619	116 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	IGLV1-51	P01701	117 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	AMBP	P02760	352 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	MT-ND6	P03923	174 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	S100A6	P06703	90 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	CXCL1	P09341	107 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	S100A4	P26447	101 aa	Known RBP	4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	RIG	Q13278	110 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	KRTAP15-1	Q3LI76	137 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	RASL11A	Q6T310	242 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	FAM159A	Q6UWV7	190 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	SMIM15	Q7Z3B0	74 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	ATP5L2	Q7Z4Y8	100 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	GTSCR1	Q86UQ5	136 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	STH	Q8IWL8	128 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	FRZB	Q92765	325 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	KCNS1	Q96KK3	526 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	PGLYRP4	Q96LB8	373 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	PYGO2	Q9BRQ0	406 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	SRD5A3	Q9H8P0	318 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	MAP6D1	Q9H9H5	199 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	FAM30A	Q9NZY2	134 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	ZMAT5	Q9UDW3	170 aa	Known RBP	4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	NAGK	Q9UJ70	344 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	TRAPPC1	Q9Y5R8	145 aa		4.14	□□□□□ -1.75
ATL1-208	ENST00000556067	CELSR1	Q9NYQ6	3014 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	TRGV11	A0A075B6L2	103 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067		A0A1B0GUT8	65 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	C7orf71	A4D174	169 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	KNCN	A6PVL3	124 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	CYSRT1	A8MQ03	144 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	HIGD1C	A8MV81	97 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067		F2Z2F3	143 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	SPINK4	O60575	86 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	CA1	P00915	261 aa	Predicted RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	TYMS	P04818	313 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	HLA-DRB4	P13762	266 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	CRISP2	P16562	243 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	ASIP	P42127	132 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	CDKN1B	P46527	198 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	KRTAP24-1	Q3LI83	254 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	MRPL54	Q6P161	138 aa	Known RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	FER1L6-AS1	Q8NA97	138 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	NUP35	Q8NFH5	326 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	HLA-DRB4	X5D2U9	266 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	F8	P00451	2351 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	FN1	P02751	2386 aa	Known RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	NSD1	Q96L73	2696 aa	Predicted RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	ANK3	Q12955	4377 aa	Known RBP	4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	SVEP1	Q4LDE5	3571 aa		4.13	□□□□□ -1.75
ATL1-208	ENST00000556067	TRAV12-3	A0A0B4J271	114 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	GRIFIN	A4D1Z8	144 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	SNURFL	B1AK76	121 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067		H3BMM0	161 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	INS	P01308	110 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	HLA-DQA1	P01909	254 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	GZMB	P10144	247 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	MAL	P21145	153 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	CAMP	P49913	170 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	CRIP1	P50238	77 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	ZNF80	P51504	273 aa	Predicted RBP	4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	FOXA3	P55318	350 aa	Predicted RBP	4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	DEFB1	P60022	68 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	CACNG7	P62955	275 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	HBB	P68871	147 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	FABP9	Q0Z7S8	132 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	FOXI1	Q12951	378 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	TWIST1	Q15672	202 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	APRG1	Q8IVJ8	170 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	FAM19A4	Q96LR4	140 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	YPEL4	Q96NS1	127 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	FAM110A	Q9BQ89	295 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	TMEM208	Q9BTX3	173 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	C1QTNF4	Q9BXJ3	329 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	GNB1L	Q9BYB4	327 aa		4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.12	□□□□□ -1.75
ATL1-208	ENST00000556067	KLLN	B2CW77	178 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	APCS	P02743	223 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	TRGC2	P03986	189 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	SPINK13	Q1W4C9	94 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	MUC21	Q5SSG8	566 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	GDF5OS	Q5U4N7	250 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	SPANXN1	Q5VSR9	72 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	MORN3	Q6PF18	240 aa	Predicted RBP	4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	LYZL1	Q6UWQ5	148 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	ZFAND2A	Q8N6M9	145 aa		4.11	□□□□□ -1.75
ATL1-208	ENST00000556067	GTSF1	Q8WW33	167 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms