RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 HIST1H2BOP23527 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BBP33778 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BDP58876 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BCP62807 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 FABP9Q0Z7S8 132 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST2H2BEQ16778 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 ACTL10Q5JWF8 245 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-204ENST00000555890 UNQ9165/PRO28630Q6UXU0 137 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 RBPMS2Q6ZRY4 209 aaKnown RBP5.16□□□□□ -1.58
SLIRP-204ENST00000555890 TSKUQ8WUA8 353 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 FRZBQ92765 325 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BHQ93079 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BNQ99877 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BMQ99879 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 GFRA4Q9GZZ7 299 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 SMPXQ9UHP9 88 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 U3KQK5 164 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 IGKV2-40A0A087WW87 121 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-204ENST00000555890 XKRY2A2RUG3 117 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 FAM231BA6NCW3 169 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 LGALS9O00182 355 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 OVOL1O14753 267 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 IGKV2D-40P01614 121 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-204ENST00000555890 TCL1AP56279 114 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 KRTAP10-3P60369 221 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 RASL11AQ6T310 242 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 KLHDC1Q8N7A1 406 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 OR2D3Q8NGH3 330 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 MYOZ3Q8TDC0 251 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 DUX5Q96PT3 197 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 RHPN1-AS1Q9BWJ2 59 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 GNB1LQ9BYB4 327 aa5.15□□□□□ -1.59
SLIRP-204ENST00000555890 TRAV8-2A0A0B4J237 113 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 ZNF705FA8MVS1 300 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-204ENST00000555890 PHOX2AO14813 284 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 SPINK4O60575 86 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 CA1P00915 261 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-204ENST00000555890 HOXA5P20719 270 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 HLA-DMBP28068 263 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 ID1P41134 155 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 CDX1P47902 265 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-204ENST00000555890 AKR1D1P51857 326 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 RPS20P60866 119 aaKnown RBP5.14□□□□□ -1.59
SLIRP-204ENST00000555890 RAB4BP61018 213 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 SMUG1Q53HV7 270 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 FAM162BQ5T6X4 162 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 TMEM78Q5T7P6 136 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 C10orf99Q6UWK7 81 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 COX8CQ7Z4L0 72 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 ATP5L2Q7Z4Y8 100 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 RNF182Q8N6D2 247 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 WIPF2Q8TF74 440 aaPredicted RBP5.14□□□□□ -1.59
SLIRP-204ENST00000555890 DPF1Q92782 380 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 BORCS7Q96B45 105 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 ZC2HC1AQ96GY0 325 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 VGLL1Q99990 258 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 NRN1Q9NPD7 142 aa5.14□□□□□ -1.59
SLIRP-204ENST00000555890 HUWE1Q7Z6Z7 4374 aaKnown RBP5.13□□□□□ -1.59
SLIRP-204ENST00000555890 TMEM189A5PLL7 270 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 FABP5P3A8MUU1 101 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 HIGD1CA8MV81 97 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 A8MWP6 167 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 SNURFLB1AK76 121 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 HLA-DQA1P01909 254 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 S100A8P05109 93 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 PRB4P10163 310 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-204ENST00000555890 CBLN1P23435 193 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 S100A2P29034 98 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 ZNF138P52744 262 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 Q6AWC8 147 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 MRPL54Q6P161 138 aaKnown RBP5.13□□□□□ -1.59
SLIRP-204ENST00000555890 ADAMTSL5Q6ZMM2 481 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 LINC00322Q6ZN03 302 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-204ENST00000555890 C9orf47Q6ZRZ4 202 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 Q6ZSV7 163 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 ZNF738Q8NE65 137 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 NUP35Q8NFH5 326 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 OR10J6PQ8NGY7 276 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 LINC00477Q96M19 166 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 C8orf49Q96NF6 230 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 ASCL2Q99929 193 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 CITED1Q99966 193 aa5.13□□□□□ -1.59
SLIRP-204ENST00000555890 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 IGHV4OR15-8A0A075B7B6 117 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 A0A087WW49 117 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 A0A1B0GW15 77 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 PRAC2D3DTV9 90 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 LINC01619G3V211 115 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 SH2D1AO60880 128 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 APCSP02743 223 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 RBMY1CP0DJD4 496 aa5.12□□□□□ -1.59
SLIRP-204ENST00000555890 HOXD3P31249 432 aaPredicted RBP5.12□□□□□ -1.59
SLIRP-204ENST00000555890 FOXA3P55318 350 aaPredicted RBP5.12□□□□□ -1.59
SLIRP-204ENST00000555890 HIST1H1AQ02539 215 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms