RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 PAX8Q06710 450 aa8.05□□□□□ -1.12
EFCAB11-208ENST00000555872 DNAJC13O75165 2243 aa8.05□□□□□ -1.12
EFCAB11-208ENST00000555872 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 AGPAT4-IT1Q9H0P7 198 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 MRPL36Q9P0J6 103 aaKnown RBP8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 IGKV1D-37A0A075B6S9 117 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 LINC00527Q9UJ94 153 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
EFCAB11-208ENST00000555872 PINLYPA6NC86 204 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 H3BVH4 76 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 NPYP01303 97 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 PLA2G2AP14555 144 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 Q0VFX4 171 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 EBI3Q14213 229 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 FAM104BQ5XKR9 115 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 ABCA1O95477 2261 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 CKS2P33552 79 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 MRPL51Q4U2R6 128 aaKnown RBP8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 C17orf77Q96MU5 243 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 SHANK2-AS3Q9BTD1 123 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 C16orf95Q9H693 158 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 OTORQ9NRC9 128 aa8.03□□□□□ -1.12
EFCAB11-208ENST00000555872 MUC6Q6W4X9 2439 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 E7EUB6 86 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 IGLV2-11P01706 119 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 ZFP2Q6ZN57 461 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 RITA1Q96K30 269 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 FOXC2Q99958 501 aa8.02□□□□□ -1.12
EFCAB11-208ENST00000555872 LOC107984156A0A0G2JMH3 177 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 SAA1P0DJI8 122 aaPredicted RBP8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 SCGB1C2P0DMR2 95 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 PSMG4Q5JS54 123 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 ARL17AQ8IVW1 177 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 U3KQK5 164 aa8.02□□□□□ -1.13
EFCAB11-208ENST00000555872 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 TRAV40A0A0B4J280 105 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 IQCF6A8MYZ5 107 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 HOXA3O43365 443 aaPredicted RBP8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 ZNRF1Q8ND25 227 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 INTS1Q8N201 2190 aaKnown RBP8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 IL4P05112 153 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 GP9P14770 177 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 KLF14Q8TD94 323 aaPredicted RBP8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 CALYQ9NYX4 217 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 PRR14LQ5THK1 2151 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 TMEM155Q4W5P6 130 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 RUSC1-AS1Q66K80 236 aa8.01□□□□□ -1.13
EFCAB11-208ENST00000555872 TIMM23O14925 209 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 CRIP1P50238 77 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 ZNF56Q15929 161 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 TMEM158Q8WZ71 300 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 ZNRD1Q9P1U0 126 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 IGHV3OR15-7A0A075B7D8 119 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 SPRY2O43597 315 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 WT1-ASQ06250 92 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 C10orf55Q5SWW7 151 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 CXXC4Q9H2H0 198 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 NDUFA4L2Q9NRX3 87 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 Q9UF83 564 aa8□□□□□ -1.13
EFCAB11-208ENST00000555872 PRRC2CQ9Y520 2896 aaKnown RBP7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 PLXNB1O43157 2135 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 TRBV7-3A0A075B6L6 115 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 IGKV1D-17A0A075B6S4 117 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 J3QKU1 62 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 TWIST1Q15672 202 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 Q8N1Y9 231 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 DPH3P1Q9H4G8 78 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 MRPL35Q9NZE8 188 aaKnown RBP7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 ZNF256Q9Y2P7 627 aaPredicted RBP7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 HOXB4P17483 251 aaPredicted RBP7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 THAP8Q8NA92 274 aa7.99□□□□□ -1.13
EFCAB11-208ENST00000555872 IGHV3-21A0A0B4J1V1 117 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 NDUFC2O95298 119 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 SPINK14Q6IE38 97 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 ZNF292O60281 2723 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 GAS8-AS1O95177 125 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 HLA-DMBP28068 263 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 VMA21Q3ZAQ7 101 aa7.98□□□□□ -1.13
EFCAB11-208ENST00000555872 CFAP47Q6ZTR5 3102 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 NCBP2LA6PVI3 153 aaKnown RBP7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 SLC25A16P16260 332 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 C17orf58Q2M2W7 97 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 CCL21O00585 134 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 NDUFA3O95167 84 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 HERVK_113P61574 105 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 C8orf49Q96NF6 230 aa7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
EFCAB11-208ENST00000555872 TRAV41A0A0B4J266 112 aa7.96□□□□□ -1.13
EFCAB11-208ENST00000555872 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.96□□□□□ -1.13
EFCAB11-208ENST00000555872 MRPL20Q9BYC9 149 aaKnown RBP7.96□□□□□ -1.13
EFCAB11-208ENST00000555872 EP300Q09472 2414 aaPredicted RBP7.96□□□□□ -1.14
EFCAB11-208ENST00000555872 SUB1P53999 127 aaKnown RBP eCLIP7.96□□□□□ -1.14
EFCAB11-208ENST00000555872 NSUN5P1Q3KNT7 163 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms