RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 F6UB75 175 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 C12orf74Q32Q52 190 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 Q8N8P6 123 aa13.65□□□□□ -0.22
RCCD1-204ENST00000555737 BUB3O43684 328 aa13.65□□□□□ -0.23
RCCD1-204ENST00000555737 APOMO95445 188 aa13.65□□□□□ -0.23
RCCD1-204ENST00000555737 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.23
RCCD1-204ENST00000555737 SPTBN4Q9H254 2564 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 A0A1B0GWB2 263 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 ARL3P36405 182 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 NPBQ8NG41 125 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 IGHV3-11P01762 117 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 CD300EQ496F6 205 aaPredicted RBP13.64□□□□□ -0.23
RCCD1-204ENST00000555737 KLHL30-AS1Q8NEE0 82 aa13.64□□□□□ -0.23
RCCD1-204ENST00000555737 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 ATP5LO75964 103 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 SRSF9Q13242 221 aaKnown RBP eCLIP13.63□□□□□ -0.23
RCCD1-204ENST00000555737 OR11H1Q8NG94 326 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 PRTN3P24158 256 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 PRR9Q5T870 116 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 C8orf86Q6ZUL3 223 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 OR11H6Q8NGC7 330 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 UBTD1Q9HAC8 227 aa13.63□□□□□ -0.23
RCCD1-204ENST00000555737 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
RCCD1-204ENST00000555737 MRPL16Q9NX20 251 aaKnown RBP13.61□□□□□ -0.23
RCCD1-204ENST00000555737 VPS13CQ709C8 3753 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 SRSF1Q07955 248 aaKnown RBP eCLIP13.61□□□□□ -0.232e-7■■■■□ 26.1
RCCD1-204ENST00000555737 Q8N9W7 124 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 METTL26Q96S19 204 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 SIGMAR1Q99720 223 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 HLA-DRB4P13762 266 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 HLA-DRB4X5D2U9 266 aa13.61□□□□□ -0.23
RCCD1-204ENST00000555737 RNASE4P34096 147 aaKnown RBP13.6□□□□□ -0.23
RCCD1-204ENST00000555737 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 CCDC144NLQ6NUI1 221 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 RAXQ9Y2V3 346 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 LINC01559Q495D7 138 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 PHLDA1Q8WV24 401 aaPredicted RBP13.6□□□□□ -0.23
RCCD1-204ENST00000555737 SPAG8Q99932 426 aaPredicted RBP13.6□□□□□ -0.23
RCCD1-204ENST00000555737 MSRB2Q9Y3D2 182 aa13.6□□□□□ -0.23
RCCD1-204ENST00000555737 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 NRACQ8N912 160 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 PTH2Q96A98 100 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 CCDC140Q96MF4 163 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 A0A087WX48 190 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 GNRH2O43555 120 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 PSMB2P49721 201 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 IGHV7-4-1A0A0J9YVY3 117 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 ZNF815PA8K554 130 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 F5H697 171 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 H7C2G1 150 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 IGKV3-20P01619 116 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 LY6G5BQ8NDX9 201 aa13.59□□□□□ -0.23
RCCD1-204ENST00000555737 CRYBG3Q68DQ2 2970 aa13.58□□□□□ -0.23
RCCD1-204ENST00000555737 SAA4P35542 130 aa13.58□□□□□ -0.24
RCCD1-204ENST00000555737 ZFAND3Q9H8U3 227 aa13.58□□□□□ -0.24
RCCD1-204ENST00000555737 HIVEP3Q5T1R4 2406 aa13.58□□□□□ -0.24
RCCD1-204ENST00000555737 TRBV12-3P01733 135 aa13.58□□□□□ -0.24
RCCD1-204ENST00000555737 ZMAT4Q9H898 229 aa13.58□□□□□ -0.24
RCCD1-204ENST00000555737 IGLV2-18A0A075B6J9 118 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 LINC01549A6NIU2 74 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 SLC25A16P16260 332 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 LY6EQ16553 131 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 CLPSL1A2RUU4 121 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 PRADC1Q9BSG0 188 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 SPANXB1Q9NS25 103 aaPredicted RBP13.57□□□□□ -0.24
RCCD1-204ENST00000555737 IGHV3-64A0A075B6Q5 118 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 FAM74A4Q5TZK3 123 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 PLEKHB2Q96CS7 222 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 C20orf173Q96LM9 149 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 JPT2Q9H910 190 aa13.57□□□□□ -0.24
RCCD1-204ENST00000555737 E9PLD3 99 aa13.56□□□□□ -0.24
RCCD1-204ENST00000555737 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
RCCD1-204ENST00000555737 ODF3BA8MYP8 253 aa13.56□□□□□ -0.24
RCCD1-204ENST00000555737 HIGD1BQ9P298 99 aa13.56□□□□□ -0.24
RCCD1-204ENST00000555737 A0A087WWL8 130 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 A6NJY4 79 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 H7C1H1 209 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 J3QR89 54 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 C2orf66Q6UXQ4 117 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 TM2D2Q9BX73 214 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 F8VRH5 84 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 HOXA3O43365 443 aaPredicted RBP13.55□□□□□ -0.24
RCCD1-204ENST00000555737 ZFP2Q6ZN57 461 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 MYMXA0A1B0GTQ4 84 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 SUMO2P61956 95 aaKnown RBP13.55□□□□□ -0.24
RCCD1-204ENST00000555737 SLC50A1Q9BRV3 221 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 SMPXQ9UHP9 88 aa13.55□□□□□ -0.24
RCCD1-204ENST00000555737 ANXA2RQ3ZCQ2 193 aa13.54□□□□□ -0.24
RCCD1-204ENST00000555737 CENPEQ02224 2701 aa13.53□□□□□ -0.24
RCCD1-204ENST00000555737 PRSS29PA6NIE9 313 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms