RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 HTN1P15515 57 aa8.2□□□□□ -1.1
SHMT2-220ENST00000555634 MUC21Q5SSG8 566 aa8.2□□□□□ -1.1
SHMT2-220ENST00000555634 PRR9Q5T870 116 aa8.2□□□□□ -1.1
SHMT2-220ENST00000555634 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
SHMT2-220ENST00000555634 MGAM2Q2M2H8 2515 aa8.2□□□□□ -1.1
SHMT2-220ENST00000555634 A0A087WWC5 75 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 SMIM9A6NGZ8 99 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 CRXO43186 299 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-220ENST00000555634 CXCL1P09341 107 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 ZNF80P51504 273 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-220ENST00000555634 RRN3P1Q2M238 152 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 RNF212Q495C1 297 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 BTF3L4Q96K17 158 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 ZMAT4Q9H898 229 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
SHMT2-220ENST00000555634 A0A1W2PPQ1 181 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 SNURFLB1AK76 121 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
SHMT2-220ENST00000555634 TDRG1Q3Y452 100 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 ANXA2RQ3ZCQ2 193 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 ZNF493Q6ZR52 646 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 SYT8Q8NBV8 401 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 TSKUQ8WUA8 353 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
SHMT2-220ENST00000555634 LINC00467Q9BRT7 94 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 GFRA4Q9GZZ7 299 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 NAT8BQ9UHF3 227 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 NOTCH1P46531 2555 aa8.18□□□□□ -1.1
SHMT2-220ENST00000555634 FAM231BA6NCW3 169 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 F2Z2F3 143 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 K7EIL1 84 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 SPRY2O43597 315 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 ZNF324O75467 553 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-220ENST00000555634 MED14OSP0DP75 135 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 FER1L6-AS1Q8NA97 138 aa8.17□□□□□ -1.1
SHMT2-220ENST00000555634 TEX48A0A1B0GUV7 120 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 CXorf65A6NEN9 183 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 H3BVH4 76 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 TYMSP04818 313 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 S100A8P05109 93 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 MIFP14174 115 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 CRIP1P50238 77 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 ZNF705AQ6ZN79 300 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-220ENST00000555634 OR11H2Q8NH07 326 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 RNF183Q96D59 192 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 NEU1Q99519 415 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 IL36BQ9NZH7 164 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 PHLDA3Q9Y5J5 127 aa8.16□□□□□ -1.1
SHMT2-220ENST00000555634 TIMM8BQ9Y5J9 83 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-220ENST00000555634 TRAV9-1A0A075B6T8 112 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 TCL1AP56279 114 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 CACNG7P62955 275 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 SPANXN1Q5VSR9 72 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
SHMT2-220ENST00000555634 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 SPXQ9BT56 116 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 SMCO4Q9NRQ5 59 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 V9GYV3 84 aa8.15□□□□□ -1.1
SHMT2-220ENST00000555634 IGKV3D-20A0A0C4DH25 116 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 GRIFINA4D1Z8 144 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 GIG44P09565 113 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-220ENST00000555634 RBMY1A1P0DJD3 496 aaKnown RBP8.14□□□□□ -1.11
SHMT2-220ENST00000555634 RBMY1CP0DJD4 496 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 DEFA6Q01524 100 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 RBMY1FQ15415 496 aaKnown RBP8.14□□□□□ -1.11
SHMT2-220ENST00000555634 C1orf158Q8N1D5 194 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 CSNK1G2-AS1Q8NCQ2 148 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 TRRAPQ9Y4A5 3859 aa8.14□□□□□ -1.11
SHMT2-220ENST00000555634 A0A1B0GW15 77 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 SMIM27A0A1W2PRY6 76 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 OR5AL1P0C617 328 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 CTRLP40313 264 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 RIGQ13278 110 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 RNASE8Q8TDE3 154 aaKnown RBP8.13□□□□□ -1.11
SHMT2-220ENST00000555634 B9D2Q9BPU9 175 aa8.13□□□□□ -1.11
SHMT2-220ENST00000555634 IGHV3-16A0A0C4DH30 117 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 M0R2P5 195 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 SMIM17P0DL12 118 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 GZMBP10144 247 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 ATP5L2Q7Z4Y8 100 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 PGLYRP4Q96LB8 373 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 AP1S3Q96PC3 154 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 NDUFAF3Q9BU61 184 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
SHMT2-220ENST00000555634 M0R381 172 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms