RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DIRC3C9JPN6 131 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 F2Z2F3 143 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 CSN1S1P47710 185 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 KIAA1644Q3SXP7 199 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 GDF5OSQ5U4N7 250 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 Q6AWC8 147 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 LINC00322Q6ZN03 302 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-213ENST00000555386 COX8CQ7Z4L0 72 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 PRNTQ86SH4 94 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 SGK494Q96LW2 274 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 ALKBH7Q9BT30 221 aaPredicted RBP7.4□□□□□ -1.22
PSEN1-213ENST00000555386 SIGLEC8Q9NYZ4 499 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 ZMAT5Q9UDW3 170 aaKnown RBP7.4□□□□□ -1.22
PSEN1-213ENST00000555386 RABAC1Q9UI14 185 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 PSG8Q9UQ74 426 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-213ENST00000555386 K7EIL1 84 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 WIPF1O43516 503 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 ZNF705DP0CH99 300 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-213ENST00000555386 ZNF705BP0CI00 300 aaPredicted RBP7.39□□□□□ -1.23
PSEN1-213ENST00000555386 RAB4AP20338 218 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 AMTP48728 403 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
PSEN1-213ENST00000555386 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 C20orf144Q9BQM9 153 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
PSEN1-213ENST00000555386 TRAV8-1A0A0A6YYK1 113 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 ZNF785A8K8V0 405 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 SAPCD1Q5SSQ6 148 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 GTSCR1Q86UQ5 136 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 OR2D3Q8NGH3 330 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 C17orf77Q96MU5 243 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 RCHY1Q96PM5 261 aa7.38□□□□□ -1.23
PSEN1-213ENST00000555386 A0A087X0K7 114 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 CD7P09564 240 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 CT45A10P0DMU9 189 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 BMI1P35226 326 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 CAMPP49913 170 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 RIGQ13278 110 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 OR2K2Q8NGT1 345 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
PSEN1-213ENST00000555386 ZC2HC1AQ96GY0 325 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 WFDC10AQ9H1F0 79 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 DNAH9Q9NYC9 4486 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 AGRNO00468 2067 aa7.37□□□□□ -1.23
PSEN1-213ENST00000555386 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 HSBP1O75506 76 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 PMCHP20382 165 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 NIT1Q86X76 327 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 BORCS7Q96B45 105 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 C2orf88Q9BSF0 95 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 VAMP8Q9BV40 100 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-213ENST00000555386 RPS20P60866 119 aaKnown RBP7.36□□□□□ -1.23
PSEN1-213ENST00000555386 KRTDAPP60985 99 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 DEFB125Q8N687 156 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 SSBP4Q9BWG4 385 aaPredicted RBP7.36□□□□□ -1.23
PSEN1-213ENST00000555386 MS4A6AQ9H2W1 248 aa7.36□□□□□ -1.23
PSEN1-213ENST00000555386 TRAV25A0A0B4J276 109 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 RBAKDNA6NC62 111 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 OR4C46A6NHA9 309 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 M0R3E3 92 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 BUB3O43684 328 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 PMCHL1Q16048 86 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 Q8N976 141 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 ASCL2Q99929 193 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 SLC50A1Q9BRV3 221 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 SMAD5-AS1Q9Y6J3 95 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 U3KQE9 123 aa7.35□□□□□ -1.23
PSEN1-213ENST00000555386 TGP01266 2768 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 OR11H12B2RN74 326 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 M0R2Z0 102 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 CRIP1P50238 77 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 ZNF493Q6ZR52 646 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 Q8N1Y9 231 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 GLMPQ8WWB7 406 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 SPAG8Q99932 426 aaPredicted RBP7.34□□□□□ -1.23
PSEN1-213ENST00000555386 CLEC5AQ9NY25 188 aa7.34□□□□□ -1.23
PSEN1-213ENST00000555386 TMEM189A5PLL7 270 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 OR5AL1P0C617 328 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 ZNF688P0C7X2 276 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 IGHV4-30-4P0DP06 118 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 NTF3P20783 257 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 ZNF124Q15973 351 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 RNASEKQ6P5S7 137 aaKnown RBP7.33□□□□□ -1.24
PSEN1-213ENST00000555386 APRG1Q8IVJ8 170 aa7.33□□□□□ -1.24
PSEN1-213ENST00000555386 MRPL53Q96EL3 112 aaKnown RBP7.33□□□□□ -1.24
PSEN1-213ENST00000555386 HUWE1Q7Z6Z7 4374 aaKnown RBP7.32□□□□□ -1.24
PSEN1-213ENST00000555386 C20orf202A1L168 122 aa7.32□□□□□ -1.24
PSEN1-213ENST00000555386 M0R143 59 aa7.32□□□□□ -1.24
PSEN1-213ENST00000555386 SH2D1AO60880 128 aa7.32□□□□□ -1.24
PSEN1-213ENST00000555386 BTF3P20290 206 aaKnown RBP7.32□□□□□ -1.24
PSEN1-213ENST00000555386 CTRLP40313 264 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms