RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 NHLRC2Q8NBF2 726 aa15□□□□□ -0.01
GABRB3-206ENST00000554556 KCNS1Q96KK3 526 aa15□□□□□ -0.01
GABRB3-206ENST00000554556 MBD2Q9UBB5 411 aa15□□□□□ -0.01
GABRB3-206ENST00000554556 HSPB11Q9Y547 144 aa15□□□□□ -0.01
GABRB3-206ENST00000554556 FAM229AH3BQW9 127 aa14.99□□□□□ -0.01
GABRB3-206ENST00000554556 PET100P0DJ07 73 aa14.99□□□□□ -0.01
GABRB3-206ENST00000554556 PPP1R1CQ8WVI7 109 aa14.99□□□□□ -0.01
GABRB3-206ENST00000554556 SDF2L1Q9HCN8 221 aa14.99□□□□□ -0.01
GABRB3-206ENST00000554556 LOC100131303A0A0U1RQF7 123 aa14.98□□□□□ -0.01
GABRB3-206ENST00000554556 PFN1P07737 140 aaKnown RBP14.98□□□□□ -0.01
GABRB3-206ENST00000554556 PQLC2Q6ZP29 291 aa14.98□□□□□ -0.01
GABRB3-206ENST00000554556 GOLT1AQ6ZVE7 132 aa14.98□□□□□ -0.01
GABRB3-206ENST00000554556 NTN5Q8WTR8 489 aaPredicted RBP14.98□□□□□ -0.01
GABRB3-206ENST00000554556 TREM1Q9NP99 234 aa14.98□□□□□ -0.01
GABRB3-206ENST00000554556 IGLV5-52A0A0A0MRZ9 124 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 TRAV8-6A0A0B4J262 113 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 A0A1W2PPV4 95 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 CIDEAO60543 219 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 SMR3BP02814 79 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-206ENST00000554556 TYMSP04818 313 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 GATA1P15976 413 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-206ENST00000554556 ACOT6Q3I5F7 207 aaPredicted RBP14.97□□□□□ -0.01
GABRB3-206ENST00000554556 LINC01556Q5JQF7 62 aa14.97□□□□□ -0.01
GABRB3-206ENST00000554556 INMT-MINDY4F8WBC2 141 aa14.96□□□□□ -0.01
GABRB3-206ENST00000554556 PRADC1Q9BSG0 188 aa14.96□□□□□ -0.01
GABRB3-206ENST00000554556 SMIM3Q9BZL3 60 aa14.96□□□□□ -0.01
GABRB3-206ENST00000554556 FBLL1A6NHQ2 334 aaKnown RBP14.95□□□□□ -0.02
GABRB3-206ENST00000554556 IBA57-AS1B1ANH7 110 aa14.95□□□□□ -0.02
GABRB3-206ENST00000554556 MPC2O95563 127 aa14.95□□□□□ -0.02
GABRB3-206ENST00000554556 RPL12P30050 165 aaKnown RBP14.95□□□□□ -0.02
GABRB3-206ENST00000554556 H2BFSP57053 126 aa14.95□□□□□ -0.02
GABRB3-206ENST00000554556 ASB13Q8WXK3 278 aa14.95□□□□□ -0.02
GABRB3-206ENST00000554556 TMEM70Q9BUB7 260 aa14.95□□□□□ -0.02
GABRB3-206ENST00000554556 LRCOL1A6NCL2 159 aa14.94□□□□□ -0.02
GABRB3-206ENST00000554556 F6UZH7 168 aa14.94□□□□□ -0.02
GABRB3-206ENST00000554556 OR10J3Q5JRS4 329 aa14.94□□□□□ -0.02
GABRB3-206ENST00000554556 NDFIP1Q9BT67 221 aa14.94□□□□□ -0.02
GABRB3-206ENST00000554556 UPK1BO75841 260 aa14.93□□□□□ -0.02
GABRB3-206ENST00000554556 TVP23CQ96ET8 276 aa14.93□□□□□ -0.02
GABRB3-206ENST00000554556 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
GABRB3-206ENST00000554556 RHOHQ15669 191 aa14.92□□□□□ -0.02
GABRB3-206ENST00000554556 ZNF876PQ49A33 203 aa14.92□□□□□ -0.02
GABRB3-206ENST00000554556 SLC25A29Q8N8R3 303 aa14.92□□□□□ -0.02
GABRB3-206ENST00000554556 TRAV8-1A0A0A6YYK1 113 aa14.91□□□□□ -0.02
GABRB3-206ENST00000554556 SERTM2A0A1B0GWG4 89 aa14.91□□□□□ -0.02
GABRB3-206ENST00000554556 TRBV6-4A0A1B0GX49 114 aa14.91□□□□□ -0.02
GABRB3-206ENST00000554556 SSNA1O43805 119 aa14.91□□□□□ -0.02
GABRB3-206ENST00000554556 Q9HAA7 133 aa14.91□□□□□ -0.02
GABRB3-206ENST00000554556 RS1O15537 224 aa14.9□□□□□ -0.02
GABRB3-206ENST00000554556 LELP1Q5T871 98 aa14.9□□□□□ -0.02
GABRB3-206ENST00000554556 Q6ZSN1 163 aa14.9□□□□□ -0.02
GABRB3-206ENST00000554556 Q8N814 137 aa14.9□□□□□ -0.02
GABRB3-206ENST00000554556 MARVELD1Q9BSK0 173 aa14.9□□□□□ -0.02
GABRB3-206ENST00000554556 K7EQM0 130 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 TAAR5O14804 337 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 GNG5P63218 68 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 CFAP126Q5VTH2 177 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 OR10G9Q8NGN4 311 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 OR10G7Q8NGN6 311 aa14.89□□□□□ -0.03
GABRB3-206ENST00000554556 DMBT1Q9UGM3 2413 aaPredicted RBP14.89□□□□□ -0.03
GABRB3-206ENST00000554556 IGHV3-30P01768 117 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 IGHV3-33P01772 117 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 IGHV3-30-3P0DP02 117 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 IGHV3-30-5P0DP03 117 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 TM2D2Q9BX73 214 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 SH3BGRL3Q9H299 93 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 WFDC1Q9HC57 220 aa14.88□□□□□ -0.03
GABRB3-206ENST00000554556 HMGB3O15347 200 aaKnown RBP14.87□□□□□ -0.03
GABRB3-206ENST00000554556 RAB2AP61019 212 aa14.87□□□□□ -0.03
GABRB3-206ENST00000554556 HAMPP81172 84 aa14.87□□□□□ -0.03
GABRB3-206ENST00000554556 ATP6V0E2Q8NHE4 81 aa14.87□□□□□ -0.03
GABRB3-206ENST00000554556 SGK494Q96LW2 274 aa14.87□□□□□ -0.03
GABRB3-206ENST00000554556 GTSF1LQ9H1H1 148 aa14.87□□□□□ -0.03
GABRB3-206ENST00000554556 IGHV3-73A0A0B4J1V6 119 aa14.86□□□□□ -0.03
GABRB3-206ENST00000554556 MGST1P10620 155 aaKnown RBP14.86□□□□□ -0.03
GABRB3-206ENST00000554556 C5orf17Q8NAS9 161 aa14.86□□□□□ -0.03
GABRB3-206ENST00000554556 PTH2Q96A98 100 aa14.86□□□□□ -0.03
GABRB3-206ENST00000554556 C1QBP02746 253 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 ARL14EPLP0DKL9 152 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 CDC34P49427 236 aaPredicted RBP14.85□□□□□ -0.03
GABRB3-206ENST00000554556 IFITM3Q01628 133 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 LAGE3Q14657 143 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 ZFP69Q49AA0 526 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 DPPA3Q6W0C5 159 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 C9orf85Q96MD7 179 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 PSG8Q9UQ74 426 aa14.85□□□□□ -0.03
GABRB3-206ENST00000554556 GCGP01275 180 aa14.84□□□□□ -0.03
GABRB3-206ENST00000554556 TCRAP04437 139 aa14.84□□□□□ -0.03
GABRB3-206ENST00000554556 ZNF80P51504 273 aaPredicted RBP14.84□□□□□ -0.03
GABRB3-206ENST00000554556 SMUG1Q53HV7 270 aa14.84□□□□□ -0.03
GABRB3-206ENST00000554556 C11orf21Q9P2W6 132 aa14.84□□□□□ -0.03
GABRB3-206ENST00000554556 FAT1Q14517 4588 aa14.84□□□□□ -0.03
GABRB3-206ENST00000554556 HERC1Q15751 4861 aa14.83□□□□□ -0.04
GABRB3-206ENST00000554556 PGPEP1LA6NFU8 196 aa14.83□□□□□ -0.04
GABRB3-206ENST00000554556 STAG3L2P0CL84 134 aa14.83□□□□□ -0.04
GABRB3-206ENST00000554556 STAG3L3P0CL85 134 aa14.83□□□□□ -0.04
GABRB3-206ENST00000554556 ZNF506Q5JVG8 444 aa14.83□□□□□ -0.04
GABRB3-206ENST00000554556 FLG2Q5D862 2391 aaPredicted RBP14.83□□□□□ -0.04
GABRB3-206ENST00000554556 DEFA1P59665 94 aa14.82□□□□□ -0.04
GABRB3-206ENST00000554556 DEFA3P59666 94 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms