RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
SHMT2-212ENST00000554467 CRYBA4P53673 196 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 HSD52Q0P140 79 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 PSG3Q16557 428 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 VGLL1Q99990 258 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 SORL1Q92673 2214 aa8.97□□□□□ -0.97
SHMT2-212ENST00000554467 PRAC2D3DTV9 90 aa8.96□□□□□ -0.97
SHMT2-212ENST00000554467 RPL24P83731 157 aaKnown RBP8.96□□□□□ -0.97
SHMT2-212ENST00000554467 HIST2H2BDQ6DRA6 164 aa8.96□□□□□ -0.97
SHMT2-212ENST00000554467 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.97
SHMT2-212ENST00000554467 MAP1LC3CQ9BXW4 147 aa8.96□□□□□ -0.97
SHMT2-212ENST00000554467 TSSC4Q9Y5U2 329 aaPredicted RBP8.96□□□□□ -0.97
SHMT2-212ENST00000554467 IGHG4P01861 327 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 IGF1P05019 195 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 GATA3P23771 443 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 ERCC8Q13216 396 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 ADAMTSL5Q6ZMM2 481 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 A0A1B0GV72 72 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 EDN2P20800 178 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 CRIP1P50238 77 aa8.96□□□□□ -0.98
SHMT2-212ENST00000554467 RBPMS2Q6ZRY4 209 aaKnown RBP8.96□□□□□ -0.98
SHMT2-212ENST00000554467 TMEM189A5PLL7 270 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 LOXL1Q08397 574 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-212ENST00000554467 GAGE12HA6NDE8 117 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.95□□□□□ -0.98
SHMT2-212ENST00000554467 SCGB2A2Q13296 93 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 OR4X2Q8NGF9 303 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 METTL26Q96S19 204 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 C19orf71A6NCJ1 209 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 CSN1S1P47710 185 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 DEFB1P60022 68 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 KRTAP1-3Q8IUG1 177 aa8.95□□□□□ -0.98
SHMT2-212ENST00000554467 K7EQM0 130 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 FAM223BA6NKX1 122 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
SHMT2-212ENST00000554467 CKS1BP61024 79 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 PDE6HQ13956 83 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 FAM223AQ8IWN6 122 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 LYPD1Q8N2G4 141 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 TMEM75Q8N9X5 138 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 WNK1Q9H4A3 2382 aa8.94□□□□□ -0.98
SHMT2-212ENST00000554467 PLA2G2AP14555 144 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 CD300EQ496F6 205 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-212ENST00000554467 FAM106AQ4KMX7 169 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 PRSS22Q9GZN4 317 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 A6NDN8 102 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 CT45A10P0DMU9 189 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 SRD5A1P18405 259 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 RPL11P62913 178 aaKnown RBP8.93□□□□□ -0.98
SHMT2-212ENST00000554467 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 PRSS3P2Q8NHM4 247 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 FBLL1A6NHQ2 334 aaKnown RBP8.93□□□□□ -0.98
SHMT2-212ENST00000554467 CRIP2P52943 208 aaPredicted RBP8.93□□□□□ -0.98
SHMT2-212ENST00000554467 KLK9Q2XQG4 91 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 KLK9Q9UKQ9 250 aa8.93□□□□□ -0.98
SHMT2-212ENST00000554467 TM4SF20Q53R12 229 aa8.92□□□□□ -0.98
SHMT2-212ENST00000554467 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
SHMT2-212ENST00000554467 OR8A1Q8NGG7 326 aa8.92□□□□□ -0.98
SHMT2-212ENST00000554467 ZNF80P51504 273 aaPredicted RBP8.92□□□□□ -0.98
SHMT2-212ENST00000554467 WFDC2Q14508 124 aa8.92□□□□□ -0.98
SHMT2-212ENST00000554467 C8orf86Q6ZUL3 223 aa8.92□□□□□ -0.98
SHMT2-212ENST00000554467 A0A096LNJ9 63 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 A0A1B0GUT8 65 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 J3QLI3 93 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 OR5AL1P0C617 328 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 PCP2Q8IVA1 136 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 NDFIP1Q9BT67 221 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 ZNF492Q9P255 531 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 J3KRW8 73 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 J3QKU1 62 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 IGLV1-40P01703 118 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 SAMD5Q5TGI4 173 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 SPATA25Q9BR10 227 aa8.91□□□□□ -0.98
SHMT2-212ENST00000554467 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
SHMT2-212ENST00000554467 TMEM213A2RRL7 107 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 INSL3P51460 131 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 Q6ZQT7 251 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 SH2D1AO60880 128 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 PRR25Q96S07 402 aa8.9□□□□□ -0.98
SHMT2-212ENST00000554467 SPAG8Q99932 426 aaPredicted RBP8.9□□□□□ -0.98
SHMT2-212ENST00000554467 K7EMI3 77 aa8.9□□□□□ -0.99
SHMT2-212ENST00000554467 FAM162BQ5T6X4 162 aa8.9□□□□□ -0.99
SHMT2-212ENST00000554467 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.99
SHMT2-212ENST00000554467 VPREB3Q9UKI3 123 aa8.9□□□□□ -0.99
SHMT2-212ENST00000554467 SMKR1H3BMG3 65 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 K7ERJ3 54 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 CFHR3Q02985 330 aa8.89□□□□□ -0.99
SHMT2-212ENST00000554467 C16orf92Q96LL3 132 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms