RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 CX3CL1P78423 397 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 ZNF90Q03938 601 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 EBI3Q14213 229 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 RPEL1Q2QD12 228 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 KLK9Q2XQG4 91 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-226ENST00000554350 SPATA31B1PQ5VZV4 182 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 PATE2Q6UY27 113 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 Q8N6K4 173 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 OR10W1Q8NGF6 305 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 NPIPB3Q92617 1050 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 URB1-AS1Q96HZ7 61 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 IGF2BP2-AS1Q96M15 143 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 PAXXQ9BUH6 204 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 DERL1Q9BUN8 251 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 SLC25A2Q9BXI2 301 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 MAP6D1Q9H9H5 199 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 PEMTQ9UBM1 199 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 KLK9Q9UKQ9 250 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 V9GYV3 84 aa4.08□□□□□ -1.76
ATXN3-226ENST00000554350 TRAV10A0A0B4J240 114 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 GGTLC3B5MD39 225 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 K7EN84 100 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 HYPMO75409 117 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 HLA-DQA1P01909 254 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 TRGV3P03979 118 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 FABP4P15090 132 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 MYOD1P15172 320 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 S100A7P31151 101 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 FCGR2BP31994 310 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-226ENST00000554350 KRTAP10-5P60370 271 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 ERVFC1-1P60608 527 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 RANP62826 216 aaKnown RBP4.07□□□□□ -1.76
ATXN3-226ENST00000554350 UBE2L3P68036 154 aaKnown RBP4.07□□□□□ -1.76
ATXN3-226ENST00000554350 MMDQ15546 238 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 TMEM183BQ1AE95 376 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 CENPWQ5EE01 88 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 OR10J3Q5JRS4 329 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 GBGT1Q8N5D6 347 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 NECAP1Q8NC96 275 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 GLMPQ8WWB7 406 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 FXYD5Q96DB9 178 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 C17orf77Q96MU5 243 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 NDUFAF3Q9BU61 184 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
ATXN3-226ENST00000554350 SERTM2A0A1B0GWG4 89 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 FBLL1A6NHQ2 334 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 NPIPB5A8MRT5 1133 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 LINC00587B1AMM8 73 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 TSTD3H0UI37 97 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 I3L2K1 104 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 PEX7O00628 323 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 SCGB2A1O75556 95 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 NBEAP1P0C6P0 100 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 IGLC1P0CG04 106 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 GZMBP10144 247 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 HIST1H1EP10412 219 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 TNXAQ16473 311 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 IQCJQ1A5X6 159 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 ANXA2RQ3ZCQ2 193 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 IBA57Q5T440 356 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 FAM162BQ5T6X4 162 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 GFI1BQ5VTD9 330 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 ZNF562Q6V9R5 426 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 LINC00305Q7Z4B0 112 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 ATP5L2Q7Z4Y8 100 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 BAGE2Q86Y30 109 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 C5orf17Q8NAS9 161 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 SRSF12Q8WXF0 261 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 GRAMD2BQ96HH9 432 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 FMC1Q96HJ9 113 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 TMEM68Q96MH6 324 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 GPR82Q96P67 336 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 ATG101Q9BSB4 218 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 C11orf68Q9H3H3 251 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 MRPL27Q9P0M9 148 aaKnown RBP4.06□□□□□ -1.76
ATXN3-226ENST00000554350 ZNF492Q9P255 531 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 EPDR1Q9UM22 224 aa4.06□□□□□ -1.76
ATXN3-226ENST00000554350 IGHV7-81A0A0B4J1V7 117 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 PGPEP1LA6NFU8 196 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 FCN1O00602 326 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 NBR2O15453 112 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 CRISP2P16562 243 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 GATA2P23769 480 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-226ENST00000554350 HLA-DMBP28068 263 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 FOXA3P55318 350 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-226ENST00000554350 PDE6HQ13956 83 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 DEFB114Q30KQ6 69 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 C10orf55Q5SWW7 151 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 UNQ5815/PRO19632Q6UWF5 114 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 MRPL52Q86TS9 123 aaKnown RBP4.05□□□□□ -1.76
ATXN3-226ENST00000554350 C6orf223Q8N319 242 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 TTC9CQ8N5M4 171 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 PRR26Q8N8Z3 221 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 OR5T1Q8NG75 326 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 OR4B1Q8NGF8 309 aa4.05□□□□□ -1.76
ATXN3-226ENST00000554350 OR11H2Q8NH07 326 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms