RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RD3LP0DJH9 198 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 MGST1P10620 155 aaKnown RBP6.46□□□□□ -1.38
TDP1-208ENST00000553989 DEFB131AP59861 70 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 USF2Q15853 346 aaPredicted RBP6.46□□□□□ -1.38
TDP1-208ENST00000553989 MLANAQ16655 118 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 TMEM136Q6ZRR5 245 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 ATP5L2Q7Z4Y8 100 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 STHQ8IWL8 128 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 IGF2BP2-AS1Q96M15 143 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 TXN2Q99757 166 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 MIEN1Q9BRT3 115 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 RABAC1Q9UI14 185 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 TRBV6-1A0A0K0K1D8 114 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 A8MWL6 223 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 GGTLC3B5MD39 225 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 I3L2K1 104 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 NBEAP1P0C6P0 100 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 GATA2P23769 480 aaPredicted RBP6.45□□□□□ -1.38
TDP1-208ENST00000553989 TCTAP57738 103 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 UBE2G1P62253 170 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 OR5I1Q13606 314 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 ODF1Q14990 250 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 CT83Q5H943 113 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 TOMM20LQ6UXN7 152 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 TEX43Q6ZNM6 134 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 TSKUQ8WUA8 353 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 GPR82Q96P67 336 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 MS4A6AQ9H2W1 248 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 TMEM14CQ9P0S9 112 aa6.45□□□□□ -1.38
TDP1-208ENST00000553989 IGKV1D-37A0A075B6S9 117 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 C20orf202A1L168 122 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 PGPA6NDG6 321 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 NUPR1O60356 82 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 SCGB2A1O75556 95 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 SERF1AO75920 110 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 TOMM40O96008 361 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 S100A7P31151 101 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 PATE2Q6UY27 113 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 LINC00305Q7Z4B0 112 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 LYPD1Q8N2G4 141 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 C5orf17Q8NAS9 161 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 OR4B1Q8NGF8 309 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 BORCS7Q96B45 105 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 FXYD5Q96DB9 178 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 DAZAP1Q96EP5 407 aaKnown RBP6.44□□□□□ -1.38
TDP1-208ENST00000553989 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 FMC1Q96HJ9 113 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 RNASE7Q9H1E1 156 aaKnown RBP6.44□□□□□ -1.38
TDP1-208ENST00000553989 OTORQ9NRC9 128 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 ZNF492Q9P255 531 aa6.44□□□□□ -1.38
TDP1-208ENST00000553989 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 TRAV30A0A087WSZ9 112 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 IGHV4-28A0A0C4DH34 117 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 A0A1W2PS18 150 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 GRIFINA4D1Z8 144 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 APOHP02749 345 aaPredicted RBP6.43□□□□□ -1.38
TDP1-208ENST00000553989 SLC25A5P05141 298 aaKnown RBP6.43□□□□□ -1.38
TDP1-208ENST00000553989 PMCHP20382 165 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 PMCHL1Q16048 86 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 ARL6IP6Q8N6S5 226 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 ZNF414Q96IQ9 312 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 C16orf92Q96LL3 132 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 ATG101Q9BSB4 218 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 VAMP8Q9BV40 100 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
TDP1-208ENST00000553989 TP53TG3Q9ULZ0 132 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 KMT2AQ03164 3969 aa6.43□□□□□ -1.38
TDP1-208ENST00000553989 IGHV4-4A0A075B6R2 117 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 TRAV2A0A0B4J234 112 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 TRAV10A0A0B4J240 114 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 A0A1B0GV90 55 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 A0A1B0GW15 77 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 DIRC3C9JPN6 131 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 K7EQM0 130 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 ZNF688P0C7X2 276 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 MIFP14174 115 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 ORM2P19652 201 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 HLA-DMBP28068 263 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 NUTF2P61970 127 aaKnown RBP6.42□□□□□ -1.38
TDP1-208ENST00000553989 MORN3Q6PF18 240 aaPredicted RBP6.42□□□□□ -1.38
TDP1-208ENST00000553989 ZNF705AQ6ZN79 300 aaPredicted RBP6.42□□□□□ -1.38
TDP1-208ENST00000553989 Q6ZTC4 211 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 Q8NAQ8 132 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 OR1B1Q8NGR6 318 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 KCNS1Q96KK3 526 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 METTL26Q96S19 204 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 NRN1Q9NPD7 142 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 CLEC5AQ9NY25 188 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 HIGD1AQ9Y241 93 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
TDP1-208ENST00000553989 FBLL1A6NHQ2 334 aaKnown RBP6.41□□□□□ -1.38
TDP1-208ENST00000553989 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
TDP1-208ENST00000553989 TCAPO15273 167 aa6.41□□□□□ -1.38
TDP1-208ENST00000553989 ZNF324O75467 553 aaPredicted RBP6.41□□□□□ -1.38
TDP1-208ENST00000553989 OR5AL1P0C617 328 aa6.41□□□□□ -1.38
TDP1-208ENST00000553989 AMTP48728 403 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms